Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   LFA_RS11775 Genome accession   NZ_LN614827
Coordinates   2863033..2863698 (-) Length   221 a.a.
NCBI ID   WP_045096365.1    Uniprot ID   -
Organism   Legionella fallonii LLAP-10     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2858033..2868698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFA_RS11760 (LFA_2585) - 2859326..2859901 (-) 576 WP_045096362.1 hypothetical protein -
  LFA_RS11765 (LFA_2586) - 2859898..2860620 (-) 723 WP_045096363.1 L,D-transpeptidase -
  LFA_RS11770 (LFA_2587) uvrC 2861166..2863022 (-) 1857 WP_045096364.1 excinuclease ABC subunit UvrC -
  LFA_RS11775 (LFA_2588) letA 2863033..2863698 (-) 666 WP_045096365.1 two-component system response regulator LetA Regulator
  LFA_RS11780 (LFA_2589) phhA 2863857..2864675 (-) 819 WP_045096366.1 phenylalanine 4-monooxygenase -
  LFA_RS11785 (LFA_2590) - 2864938..2866044 (+) 1107 WP_045096367.1 molybdopterin-binding protein -
  LFA_RS11790 (LFA_2591) cgtA 2865991..2867016 (-) 1026 WP_045096368.1 Obg family GTPase CgtA -
  LFA_RS11795 (LFA_2592) rpmA 2867253..2867531 (-) 279 WP_045096369.1 50S ribosomal protein L27 -
  LFA_RS11800 (LFA_2593) rplU 2867546..2867857 (-) 312 WP_045096370.1 50S ribosomal protein L21 -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 24829.89 Da        Isoelectric Point: 5.3841

>NTDB_id=1113629 LFA_RS11775 WP_045096365.1 2863033..2863698(-) (letA) [Legionella fallonii LLAP-10]
MIKVLIVDDHALVRMGIRRLLEDMSDVNVVADAENGEQALQLVKIHTPDVVLLDMKMPGIDGWEVTRRLKKSNPHVKVIA
VTAICSEPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKGEKYLSAEIAQKMAINSLQEAQESPFDMLSEREMQVMLMI
TSGMNVQDIADRLFLSSKTINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPSDSDITQDD

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1113629 LFA_RS11775 WP_045096365.1 2863033..2863698(-) (letA) [Legionella fallonii LLAP-10]
TTGATTAAAGTATTAATTGTTGATGACCATGCATTGGTTAGAATGGGTATTCGACGATTGCTTGAAGATATGTCGGACGT
AAATGTTGTTGCTGATGCAGAAAATGGTGAGCAAGCATTACAGCTGGTAAAAATACATACTCCCGATGTAGTCCTTTTAG
ATATGAAAATGCCTGGGATTGATGGGTGGGAAGTAACTCGCCGCCTAAAAAAATCCAATCCTCATGTTAAGGTGATTGCT
GTTACGGCAATATGTTCTGAGCCTCTGCCTACACGAGTTTTGCAATTAGGCGCTATGGGATATCTTACAAAAGAATCTGG
AGCCGAGGAAATGGCTGCTGCAATAAGGAAAGTTGCTAAGGGTGAAAAATATCTCAGTGCTGAAATTGCGCAGAAAATGG
CAATCAATAGTTTACAGGAAGCACAGGAGTCGCCTTTCGACATGTTGTCCGAGCGCGAAATGCAAGTCATGTTGATGATT
ACCAGTGGTATGAATGTGCAAGATATTGCTGATAGACTGTTTCTGAGTAGTAAAACTATTAATGGCTACCGATATCGCAT
GTTCGAGAAATTAGGGATTAAAAATGATGTAGAGCTTACTTATTTAGCAATGAAGCATCGCATCATAGAGCATCCTTCAG
ATTCAGATATAACGCAAGACGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

91.855

100

0.919

  letA Legionella pneumophila strain ERS1305867

91.855

100

0.919


Multiple sequence alignment