Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   LFA_RS10585 Genome accession   NZ_LN614827
Coordinates   2596800..2597504 (+) Length   234 a.a.
NCBI ID   WP_084602162.1    Uniprot ID   A0A098G5I0
Organism   Legionella fallonii LLAP-10     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2591800..2602504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFA_RS10560 (LFA_2336) - 2592018..2593136 (+) 1119 WP_045096158.1 hypothetical protein -
  LFA_RS10565 (LFA_2337) - 2593404..2594330 (+) 927 WP_045096159.1 hypothetical protein -
  LFA_RS10570 (LFA_2338) - 2594566..2594796 (+) 231 WP_045096160.1 exodeoxyribonuclease VII small subunit -
  LFA_RS10575 (LFA_2339) - 2594777..2595730 (+) 954 WP_172653473.1 polyprenyl synthetase family protein -
  LFA_RS10580 (LFA_2340) bioC 2595900..2596757 (-) 858 WP_045097548.1 malonyl-ACP O-methyltransferase BioC -
  LFA_RS10585 (LFA_2341) comFC 2596800..2597504 (+) 705 WP_084602162.1 ComF family protein Machinery gene
  LFA_RS10590 (LFA_2342) - 2597575..2598648 (-) 1074 WP_045096162.1 RIP metalloprotease -
  LFA_RS10595 (LFA_2343) - 2598768..2599043 (-) 276 WP_045096163.1 hypothetical protein -
  LFA_RS10600 (LFA_2344) hemA 2599475..2600749 (+) 1275 WP_045096164.1 glutamyl-tRNA reductase -
  LFA_RS10605 (LFA_2345) prfA 2600733..2601821 (+) 1089 WP_045096165.1 peptide chain release factor 1 -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26575.46 Da        Isoelectric Point: 10.1480

>NTDB_id=1113627 LFA_RS10585 WP_084602162.1 2596800..2597504(+) (comFC) [Legionella fallonii LLAP-10]
MRQKLLSIAQTLRLPSICTLCNQFHKSSLAVCSYCAKYIKPLGLACRSCAYPLPDEGYMLCGQCIKKPPAFNNALIHYIF
EEPLRSLLHQFKYHNGLYLTSFLGQLMLHSIQKQPIAAQCLIPVPMHPQRLKQRGFNQAVVLAKFLSRKLNLPYDPVSCQ
KIINTQPQASLDSEQRKKNLRKAFRVHPLPYQHVVLIDDLLTTGSTANELARAIKKTGVKQVDVWCCARTISKR

Nucleotide


Download         Length: 705 bp        

>NTDB_id=1113627 LFA_RS10585 WP_084602162.1 2596800..2597504(+) (comFC) [Legionella fallonii LLAP-10]
GTGCGCCAGAAACTACTTAGTATAGCACAGACTTTGCGTCTGCCTTCAATATGCACACTTTGTAACCAATTCCATAAAAG
CTCTTTAGCAGTATGCTCCTACTGTGCTAAATACATTAAACCCTTAGGCCTTGCTTGCCGTTCTTGCGCCTATCCTCTTC
CTGATGAAGGTTATATGCTCTGTGGTCAATGCATTAAAAAACCACCGGCGTTTAATAATGCTTTGATACACTATATTTTT
GAAGAGCCATTACGCTCTTTGCTGCATCAATTTAAATACCATAACGGACTCTATCTTACTTCTTTTCTTGGTCAGTTAAT
GCTTCACTCCATACAAAAACAGCCTATTGCTGCTCAATGTTTAATCCCTGTCCCTATGCACCCACAAAGACTGAAACAAC
GAGGATTTAACCAAGCAGTGGTCTTGGCCAAATTCTTATCACGAAAGCTAAATCTCCCTTATGATCCCGTGAGTTGTCAA
AAGATAATTAATACTCAACCTCAAGCCAGCCTGGATAGCGAGCAAAGGAAAAAAAATTTACGAAAAGCTTTTCGTGTACA
TCCATTGCCTTACCAGCATGTCGTTTTAATTGATGATCTGTTAACAACCGGAAGTACCGCTAATGAATTAGCACGTGCCA
TAAAAAAGACAGGAGTGAAACAAGTGGATGTTTGGTGTTGTGCCAGAACTATCAGTAAAAGGTAG

Domains

Predicted by InterproScan.

Phosphoribosyl transferase domain (Pribosyltran)

(138-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098G5I0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Legionella pneumophila str. Paris

65.236

99.573

0.65
  comFC Legionella pneumophila strain ERS1305867

63.077

83.333

0.526

Multiple sequence alignment