Detailed information NTG1113610

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LFA_RS04940
• Genome accession: NZ_LN614827
• Coordinates: 1233774..1235099 (+)
• Length: 441 a.a.
• NCBI ID: WP_045095189.1
• Uniprot ID: -
• Organism: Legionella fallonii LLAP-10
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1228774..1240099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LFA_RS04920 (LFA_1107)	-	1228913..1229899 (-)	987	WP_172653459.1	hypothetical protein	-
LFA_RS04925 (LFA_1108)	-	1230025..1230402 (-)	378	WP_045095186.1	DUF3775 domain-containing protein	-
LFA_RS04930 (LFA_1109)	-	1230652..1232121 (+)	1470	WP_045095187.1	SEL1-like repeat protein	-
LFA_RS04935 (LFA_1110)	-	1232188..1233777 (+)	1590	WP_045095188.1	PAS domain-containing sensor histidine kinase	-
LFA_RS04940 (LFA_1111)	pilR	1233774..1235099 (+)	1326	WP_045095189.1	sigma-54 dependent transcriptional regulator	Regulator
LFA_RS04945 (LFA_1112)	ankD	1235231..1236640 (+)	1410	WP_045095190.1	Dot/Icm T4SS effector AnkD/LegA15	-
LFA_RS04950 (LFA_1113)	-	1236771..1237016 (+)	246	WP_045095191.1	hypothetical protein	-
LFA_RS04955 (LFA_1114)	-	1237186..1237884 (-)	699	WP_045095192.1	RES family NAD+ phosphorylase	-
LFA_RS04960 (LFA_1115)	-	1237884..1238282 (-)	399	WP_045095193.1	MbcA/ParS/Xre antitoxin family protein	-

Sequence

Protein

• Length: 441 a.a.
• Molecular weight: 49044.20 Da
• Isoelectric Point: 7.4481

>NTDB_id=1113610 LFA_RS04940 WP_045095189.1 1233774..1235099(+) (pilR) [Legionella fallonii LLAP-10]
MTRSNVLVIDDEPDIRELFMLTLSRMGVSCDTAVDFKQGLDRIKQNNYSLVLTDMRLPDGDGIEIVKFIQKFKPQLPVAV
ITAYGNVEGAVNTLKAGAFDYVSKPIDLVMLKELVKTALAMKNVTQEEHDGLLVGDSLVMQQLRENIQKLARNQAPVFIQ
GDSGVGKELVAQLIHAHGPRMDKPFIPVNCGAIPAELMESEFFGHKKGSFTGAIADKSGLFVAAHGGTLFLDEIAELPLA
MQVKLLRAIQEKAIKPIGELYEIPVDVRILSASHKNLLEEISAGRFRQDLYYRVNVIELRVPTLSERLSDIPSLASTIIK
KLTKNQKKHSVTLRPECLDVLQNYHFPGNVRELENILERAMAMCEGDVIEVKDLYIPQIATMPPIVSSSTSAGLTGFLLD
QEKELILDALKKTKWNRTAAARLLGVSFRTLRYRLKKLGLD

Nucleotide

• Length: 1326 bp

>NTDB_id=1113610 LFA_RS04940 WP_045095189.1 1233774..1235099(+) (pilR) [Legionella fallonii LLAP-10]
ATGACTAGAAGTAATGTGCTCGTTATAGACGATGAACCTGATATTCGTGAATTATTCATGCTGACTTTATCGCGCATGGG
GGTGTCTTGTGATACTGCTGTTGATTTCAAGCAAGGTTTAGACCGCATTAAACAAAATAACTACTCTCTTGTTTTAACCG
ACATGCGTTTACCCGATGGCGATGGTATAGAAATTGTCAAGTTTATCCAGAAGTTTAAGCCGCAACTTCCTGTAGCAGTA
ATCACTGCCTATGGCAATGTGGAGGGGGCCGTTAATACTCTAAAAGCAGGCGCTTTTGATTATGTGTCTAAACCTATTGA
TTTAGTCATGTTAAAAGAGCTCGTTAAAACTGCTTTAGCGATGAAGAATGTTACTCAAGAAGAACACGATGGATTACTTG
TTGGCGATAGTCTAGTCATGCAACAGTTGAGAGAAAATATTCAAAAACTTGCTCGTAATCAAGCCCCAGTTTTTATTCAA
GGAGATTCCGGGGTGGGTAAGGAGCTAGTTGCTCAATTGATCCATGCCCATGGCCCAAGAATGGATAAACCTTTTATACC
GGTCAATTGTGGGGCTATTCCTGCAGAATTGATGGAATCTGAATTTTTTGGCCATAAAAAAGGAAGTTTTACAGGAGCAA
TAGCCGATAAATCAGGTTTATTTGTTGCGGCACATGGCGGTACTTTATTTCTTGATGAAATAGCTGAACTTCCCTTAGCA
ATGCAGGTTAAATTACTCCGCGCGATTCAGGAAAAAGCAATTAAGCCTATCGGTGAATTATACGAGATTCCAGTTGATGT
GCGAATTTTAAGCGCAAGTCACAAGAATTTATTGGAGGAAATAAGCGCTGGTAGATTTAGACAAGATTTATATTATCGTG
TTAATGTAATCGAATTACGTGTCCCTACTTTATCAGAAAGATTATCTGACATTCCTTCTTTAGCTTCGACAATCATAAAA
AAACTGACTAAAAACCAAAAGAAACATTCCGTTACTCTGCGGCCTGAGTGCTTGGATGTGTTGCAAAACTATCATTTCCC
TGGCAATGTCCGAGAGTTAGAAAATATTCTAGAACGCGCTATGGCAATGTGTGAGGGAGATGTCATTGAGGTAAAAGACT
TGTATATACCTCAAATAGCCACGATGCCCCCCATTGTTTCTTCATCCACCTCGGCTGGCTTGACAGGGTTCCTATTGGAT
CAGGAAAAAGAATTAATTCTTGATGCGCTCAAGAAAACCAAATGGAATAGAACTGCCGCAGCTCGATTATTAGGGGTGAG
TTTTAGAACCTTAAGATATAGGTTAAAAAAATTAGGCCTCGACTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (133-299)

• Bacterial regulatory protein, Fis family (HTH_8) (400-438)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.528	100	0.58
pilR	Acinetobacter baumannii strain A118	48.268	100	0.506