Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   LFA_RS03245 Genome accession   NZ_LN614827
Coordinates   824569..827310 (-) Length   913 a.a.
NCBI ID   WP_157010267.1    Uniprot ID   -
Organism   Legionella fallonii LLAP-10     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 819569..832310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFA_RS03220 (LFA_0730) - 819696..820097 (+) 402 WP_045094898.1 VOC family protein -
  LFA_RS03225 (LFA_0731) - 820244..820687 (-) 444 WP_045094899.1 hypothetical protein -
  LFA_RS03230 (LFA_0732) - 820851..821579 (+) 729 WP_045094900.1 response regulator transcription factor -
  LFA_RS03235 (LFA_0733) - 821576..822829 (+) 1254 WP_045094901.1 cell wall metabolism sensor histidine kinase WalK -
  LFA_RS03240 (LFA_0734) - 823309..824547 (-) 1239 WP_045094902.1 6-phosphofructokinase -
  LFA_RS03245 (LFA_0735) letS 824569..827310 (-) 2742 WP_157010267.1 two-component system sensor histidine kinase LetS Regulator
  LFA_RS03250 (LFA_0736) gltX 827409..828824 (+) 1416 WP_045094904.1 glutamate--tRNA ligase -
  LFA_RS03255 (LFA_0737) - 829073..830647 (+) 1575 WP_045094905.1 ankyrin repeat domain-containing protein -
  LFA_RS03260 (LFA_0738) - 830920..831336 (-) 417 WP_045094906.1 hypothetical protein -

Sequence


Protein


Download         Length: 913 a.a.        Molecular weight: 102772.69 Da        Isoelectric Point: 6.6797

>NTDB_id=1113603 LFA_RS03245 WP_157010267.1 824569..827310(-) (letS) [Legionella fallonii LLAP-10]
MLKSIGIKYQLRITTLIPAFLVAVLFAVFYNDQFGKDLQQHTSRLGEAYIRQLLPAAQYALLRHDTRTLQGLINASTINP
EVKALAFYNANGQLLAYRGGKHSLHKPFNPPDFTGDYIESRQINPFTINFIAPITIPKFNLYSKSSVANSLSPSVFQADD
ILGWLSIDIDTQSTLIKRYQMMIVTIFITLFGLLIGLTIHYFLSKQIYVPIARLRRSMKQILSNEFETEIRVSSKGELGV
IEKGCTHLQQQYLSTIRDLNQHIETATEDLQQSLELLEEKNIELSLDKKKSEEKSRQKSEFIANMSHEIRTPMNGVIGFT
NVLLESKLDPLQLDYVKTIKQSAQDLLGIINDILDFSKIEAGKLHLDCIPVDIRGCVDDVLALASPNAHKKGVDLIPITE
VNVPKTVLGDPFRIKQIISNLVTNAIKFTDHGHVLIRTKIEQETEKDYTLCITIIDTGIGISPEDQNRLFTAFNQADTSI
TRRYGGSGLGLVICKKLCEEMQGRITLASELHKGSAFSAYIRVEKLMAYEIEKNQPHRFAHLKVLCFDDNSLHLEALCNG
LGYWGIECVPVHAFNKLAKAIDKNKDCKIAFVSVNQGYEQQIAELIAKHNHLPYVLLSKWPINNYTALGAQGFVHKPAII
QKLQELIESLSPINNEVYSEKTFNHELDSLREQLRFLHPELLIAEDNPVNKMLLNSLLSDNATVTAVDDGEMAVSACEEK
KYDLILLDLHMPKLNGLDAAQTIKQKSSLNKHSPIVVISANGNEISTADLKKSGVDFCLQKPIDEKQLLVQILRIVDKAK
HAAIDWQLCIQKVSGNQALAEEFLAKFIEELYKNREEFIQLMHEKNIKGMGDAAHKLHGACCFCGVPLLQKKVMQLEKLA
LRATTIEELNDPFAELIQSIDAVISEYENQYSQ

Nucleotide


Download         Length: 2742 bp        

>NTDB_id=1113603 LFA_RS03245 WP_157010267.1 824569..827310(-) (letS) [Legionella fallonii LLAP-10]
ATCTTGAAAAGTATTGGTATTAAATATCAGCTTAGAATCACTACACTTATCCCTGCTTTTTTAGTCGCTGTCCTTTTTGC
AGTTTTTTATAACGATCAATTTGGTAAAGACTTACAACAACATACGTCTCGTTTGGGTGAGGCTTATATCCGTCAGTTAC
TGCCGGCTGCTCAATATGCATTGCTTCGTCATGATACGCGAACGCTGCAGGGGTTAATCAACGCATCCACAATCAATCCA
GAGGTGAAAGCTTTAGCCTTTTATAACGCTAATGGGCAATTGTTAGCTTATCGAGGAGGAAAACATTCACTGCATAAACC
GTTTAATCCCCCTGATTTCACAGGTGATTATATAGAAAGCAGGCAAATTAATCCCTTTACTATTAACTTTATCGCACCAA
TTACTATCCCTAAATTTAATCTCTACTCCAAAAGCTCCGTTGCCAACTCGTTAAGTCCTTCTGTATTTCAAGCCGATGAC
ATCTTAGGATGGTTGTCTATAGATATAGATACCCAATCCACACTTATCAAGCGCTATCAAATGATGATAGTAACTATCTT
CATTACCTTATTTGGTCTGTTAATAGGATTGACCATCCATTACTTTTTATCGAAGCAGATTTATGTGCCCATCGCTCGTT
TACGTCGCAGTATGAAACAGATACTAAGCAATGAATTTGAAACGGAAATTCGCGTATCCAGTAAAGGAGAGTTAGGGGTT
ATTGAAAAAGGATGCACTCACTTACAGCAACAGTATTTAAGTACCATTCGTGATCTCAACCAACACATTGAGACAGCAAC
TGAGGATTTGCAACAAAGTCTAGAACTCTTAGAAGAAAAAAATATAGAGCTGTCACTGGATAAGAAAAAAAGCGAAGAAA
AAAGCCGGCAAAAATCAGAGTTTATAGCAAATATGAGCCATGAAATTCGTACTCCTATGAATGGCGTTATAGGCTTCACC
AATGTTTTACTTGAAAGTAAATTGGATCCGCTGCAATTGGATTATGTCAAAACAATCAAACAATCAGCCCAAGATTTATT
AGGTATTATTAATGACATACTTGATTTTTCTAAAATAGAAGCAGGTAAATTACATTTGGATTGCATCCCCGTTGACATTC
GTGGATGTGTTGATGACGTACTGGCTCTAGCCAGTCCTAATGCTCATAAAAAAGGAGTAGATTTAATTCCGATCACTGAA
GTGAATGTGCCTAAAACTGTTTTAGGTGATCCCTTTAGGATTAAACAAATCATCAGCAATCTAGTCACTAATGCTATAAA
ATTTACTGACCATGGTCATGTATTAATCCGTACCAAAATCGAGCAAGAAACTGAAAAAGACTATACCTTATGTATTACTA
TCATCGATACCGGTATAGGGATTTCACCAGAAGATCAAAACAGGCTCTTTACTGCCTTTAACCAAGCAGATACAAGTATC
ACCAGGCGATATGGCGGTTCCGGTTTAGGGTTGGTTATATGCAAAAAATTATGCGAAGAAATGCAAGGACGTATCACCCT
CGCTAGTGAATTGCACAAAGGCTCCGCTTTTTCGGCCTATATTAGAGTAGAAAAATTGATGGCCTATGAGATAGAAAAAA
ATCAACCTCATCGTTTTGCTCATCTAAAAGTACTCTGTTTTGATGATAATTCATTACATTTAGAAGCATTATGTAATGGT
TTGGGTTATTGGGGAATAGAATGTGTTCCCGTCCATGCATTTAACAAATTAGCCAAAGCCATAGACAAAAATAAAGACTG
TAAAATAGCCTTCGTTAGCGTCAATCAAGGTTATGAACAACAAATTGCAGAACTTATAGCCAAACACAATCACCTCCCTT
ATGTATTACTCTCTAAATGGCCAATAAATAATTACACGGCCCTTGGAGCTCAAGGCTTCGTGCATAAGCCAGCCATCATA
CAAAAACTTCAAGAGCTCATCGAGTCATTAAGTCCGATAAATAATGAGGTTTATTCTGAGAAAACGTTCAACCATGAATT
GGATAGTTTGCGTGAACAATTACGCTTTCTCCATCCTGAGTTGTTAATTGCGGAAGATAATCCAGTTAATAAAATGCTGC
TTAATTCCCTGCTCAGTGACAACGCCACCGTTACTGCGGTAGATGATGGCGAAATGGCTGTCTCTGCTTGTGAAGAAAAG
AAATATGACCTTATTCTACTGGATCTGCATATGCCGAAATTAAACGGCTTGGATGCAGCACAGACGATAAAGCAAAAATC
ATCACTCAATAAACATTCCCCTATCGTCGTCATCAGTGCTAATGGAAACGAGATTAGCACCGCTGATTTGAAAAAATCTG
GGGTAGATTTCTGTTTGCAAAAACCAATAGATGAAAAGCAATTATTAGTACAAATACTGCGTATCGTCGATAAAGCAAAA
CATGCCGCTATTGATTGGCAACTATGTATACAAAAAGTTTCTGGTAATCAAGCGCTAGCTGAAGAGTTTCTTGCCAAATT
TATCGAAGAGCTCTATAAAAATCGCGAAGAGTTTATTCAGCTAATGCACGAAAAAAATATCAAAGGCATGGGAGATGCGG
CCCATAAACTTCATGGAGCCTGCTGTTTTTGTGGTGTACCCCTATTACAAAAGAAGGTAATGCAACTAGAGAAATTAGCG
CTACGCGCTACAACAATTGAAGAATTAAATGACCCTTTTGCTGAGTTAATACAGAGTATCGATGCAGTAATTAGTGAGTA
TGAAAATCAATACTCTCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

80.942

100

0.809


Multiple sequence alignment