Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | LFA_RS00840 | Genome accession | NZ_LN614827 |
| Coordinates | 207015..207698 (+) | Length | 227 a.a. |
| NCBI ID | WP_045094512.1 | Uniprot ID | A0A098G110 |
| Organism | Legionella fallonii LLAP-10 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 202015..212698
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFA_RS00825 (LFA_0187) | - | 202579..202761 (-) | 183 | WP_045094509.1 | dodecin domain-containing protein | - |
| LFA_RS00830 (LFA_0188) | - | 203052..205490 (+) | 2439 | WP_045094510.1 | oxidoreductase | - |
| LFA_RS00835 (LFA_0189) | dapB | 205616..206347 (-) | 732 | WP_045094511.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| LFA_RS20005 | - | 206470..206646 (-) | 177 | WP_172653442.1 | hypothetical protein | - |
| LFA_RS00840 (LFA_0190) | rocC | 207015..207698 (+) | 684 | WP_045094512.1 | ProQ/FinO family protein | Regulator |
| LFA_RS00845 (LFA_0191) | - | 207720..208769 (+) | 1050 | WP_407927642.1 | hypothetical protein | - |
| LFA_RS00850 (LFA_0192) | - | 208860..210083 (-) | 1224 | WP_045094514.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25354.11 Da Isoelectric Point: 10.6308
>NTDB_id=1113601 LFA_RS00840 WP_045094512.1 207015..207698(+) (rocC) [Legionella fallonii LLAP-10]
MRRQELHPRTAVINKKQKNKSKKARLDALSWLAVTFPNAFDNSVSISPLKKGIMADIMEYAEQAVQAGISKSKLREAVVL
FTRRLDYLTCLKAREMRIDLQGNVVSEVTDEEAEHASVKIKRRVEKSVRNARKILSEKNSNPPTMSPQQGSGYSFKASNS
QPVSAPDDFLPIYPPRSPQSAPAQPARSAAVVVKHKTTKQFDPDAIARLKEKLGLSRSLEEKKETAE
MRRQELHPRTAVINKKQKNKSKKARLDALSWLAVTFPNAFDNSVSISPLKKGIMADIMEYAEQAVQAGISKSKLREAVVL
FTRRLDYLTCLKAREMRIDLQGNVVSEVTDEEAEHASVKIKRRVEKSVRNARKILSEKNSNPPTMSPQQGSGYSFKASNS
QPVSAPDDFLPIYPPRSPQSAPAQPARSAAVVVKHKTTKQFDPDAIARLKEKLGLSRSLEEKKETAE
Nucleotide
Download Length: 684 bp
>NTDB_id=1113601 LFA_RS00840 WP_045094512.1 207015..207698(+) (rocC) [Legionella fallonii LLAP-10]
ATGAGAAGACAGGAGCTGCATCCGCGCACCGCTGTTATTAATAAAAAGCAAAAAAATAAATCTAAAAAAGCCAGACTTGA
TGCGTTGTCCTGGCTTGCGGTGACTTTCCCTAACGCATTTGATAATTCAGTCTCTATTAGCCCTTTAAAGAAGGGAATTA
TGGCTGATATTATGGAATATGCCGAGCAAGCTGTTCAAGCAGGTATTTCTAAAAGTAAATTAAGAGAGGCAGTTGTATTA
TTCACTCGCCGTCTTGATTATTTGACTTGCCTTAAAGCACGGGAAATGCGGATTGATTTACAAGGTAATGTGGTTTCTGA
AGTGACTGACGAAGAAGCGGAACATGCTTCTGTAAAAATAAAAAGACGAGTAGAAAAAAGTGTGAGAAATGCTCGCAAAA
TTTTATCAGAGAAAAATTCAAATCCACCCACTATGTCACCGCAGCAAGGATCAGGATATAGCTTCAAGGCAAGCAACAGT
CAGCCTGTATCTGCGCCTGATGACTTTTTACCAATCTATCCACCGAGAAGTCCGCAATCTGCTCCAGCTCAGCCCGCGCG
TTCTGCAGCGGTGGTTGTGAAGCATAAAACAACGAAGCAATTTGATCCTGATGCTATCGCACGATTGAAAGAAAAATTAG
GTTTATCACGTAGCTTGGAAGAGAAAAAAGAAACGGCTGAATAA
ATGAGAAGACAGGAGCTGCATCCGCGCACCGCTGTTATTAATAAAAAGCAAAAAAATAAATCTAAAAAAGCCAGACTTGA
TGCGTTGTCCTGGCTTGCGGTGACTTTCCCTAACGCATTTGATAATTCAGTCTCTATTAGCCCTTTAAAGAAGGGAATTA
TGGCTGATATTATGGAATATGCCGAGCAAGCTGTTCAAGCAGGTATTTCTAAAAGTAAATTAAGAGAGGCAGTTGTATTA
TTCACTCGCCGTCTTGATTATTTGACTTGCCTTAAAGCACGGGAAATGCGGATTGATTTACAAGGTAATGTGGTTTCTGA
AGTGACTGACGAAGAAGCGGAACATGCTTCTGTAAAAATAAAAAGACGAGTAGAAAAAAGTGTGAGAAATGCTCGCAAAA
TTTTATCAGAGAAAAATTCAAATCCACCCACTATGTCACCGCAGCAAGGATCAGGATATAGCTTCAAGGCAAGCAACAGT
CAGCCTGTATCTGCGCCTGATGACTTTTTACCAATCTATCCACCGAGAAGTCCGCAATCTGCTCCAGCTCAGCCCGCGCG
TTCTGCAGCGGTGGTTGTGAAGCATAAAACAACGAAGCAATTTGATCCTGATGCTATCGCACGATTGAAAGAAAAATTAG
GTTTATCACGTAGCTTGGAAGAGAAAAAAGAAACGGCTGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
64.935 |
100 |
0.661 |