Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HMPREF9318_RS08845 Genome accession   NZ_KB373319
Coordinates   189675..191477 (+) Length   600 a.a.
NCBI ID   WP_006739455.1    Uniprot ID   G5KE76
Organism   Streptococcus urinalis FB127-CNA-2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 184675..196477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9318_RS08815 (HMPREF9318_01766) - 185513..186262 (-) 750 WP_006740264.1 AraC family transcriptional regulator -
  HMPREF9318_RS08820 (HMPREF9318_01767) - 186378..187112 (+) 735 WP_006738834.1 SDR family oxidoreductase -
  HMPREF9318_RS08825 (HMPREF9318_01768) - 187125..187964 (+) 840 WP_006739437.1 SDR family NAD(P)-dependent oxidoreductase -
  HMPREF9318_RS08830 (HMPREF9318_01769) - 188066..188395 (+) 330 WP_006740728.1 PadR family transcriptional regulator -
  HMPREF9318_RS08835 (HMPREF9318_01770) - 188382..188933 (+) 552 WP_006740374.1 DUF2812 domain-containing protein -
  HMPREF9318_RS08840 (HMPREF9318_01771) - 189217..189675 (+) 459 WP_006738845.1 MarR family winged helix-turn-helix transcriptional regulator -
  HMPREF9318_RS08845 (HMPREF9318_01772) rcrP 189675..191477 (+) 1803 WP_006739455.1 ABC transporter ATP-binding protein Regulator
  HMPREF9318_RS08850 (HMPREF9318_01773) rcrQ 191467..193218 (+) 1752 WP_006739588.1 ABC transporter ATP-binding protein Regulator
  HMPREF9318_RS08855 (HMPREF9318_01774) - 193234..193596 (-) 363 WP_006740096.1 LPXTG cell wall anchor domain-containing protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66409.20 Da        Isoelectric Point: 8.9331

>NTDB_id=1113395 HMPREF9318_RS08845 WP_006739455.1 189675..191477(+) (rcrP) [Streptococcus urinalis FB127-CNA-2]
MFKIIKRLNAKEWGMIALSTLFICLAVWADLKSPSYMSKITTLLQTKGTTAADIMDPGSKMLLFSFGSFMSAVIVGFLAS
RTAASFTTRLRSDVFNQVIDFSDAEIKQFSVPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAAWALTKIWGKSDHWTMA
VGVAVVIVMILLLFILSVAFPRMRKIQGLTDNLNGTTREILSGIRVVRAYNAEDYQDAKFNKENIALTNLNLFVNRIMAL
MNPVMTVVSSGLTLVIYWIGVHLIDDVTISKTSMALAMSNVKERVSIFSDMVVFSSYAMQVIMGFMMMVAIFIILPRAMV
SAGRINEVLALKPSVNFSEEKAHESVEKGSISFQDVSFRYVKESKDVIEHVSFEAKAGQTVAFIGSTGSGKSTLVNLIPR
LYDVTQGAILVDGINIKDYSHQELNNKVGYIPQKAVLFSGTVRSNMNFGQSQQGHINDAAIWDALELAQAKDFIEGNEKG
LDATVSQGGNNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRQLRYDLSQKTKEMTKIIVAQRISTIMDADLIL
VLDEGKVVGQGTHKELLAENSVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1113395 HMPREF9318_RS08845 WP_006739455.1 189675..191477(+) (rcrP) [Streptococcus urinalis FB127-CNA-2]
ATGTTTAAGATTATTAAACGTTTAAATGCCAAAGAGTGGGGTATGATTGCACTTAGTACGCTTTTTATCTGCTTGGCGGT
TTGGGCTGATTTAAAATCGCCTTCTTATATGTCAAAAATTACCACACTTTTACAAACCAAAGGTACAACTGCTGCTGATA
TTATGGATCCAGGCTCAAAAATGCTATTATTTTCATTTGGTTCTTTTATGTCTGCGGTTATTGTTGGTTTTCTAGCTTCT
CGTACAGCAGCTAGTTTTACTACACGTTTACGTTCTGATGTTTTCAATCAAGTCATTGATTTTTCAGATGCTGAAATTAA
ACAATTTTCTGTGCCTTCACTCTTGACAAGAACAACTAATGACTTGACGCAATTGCAGATAATGATTGTCATGGGGATGC
AGGTTGTCACTCGTGGTCCCATTATGGCAGCATGGGCTTTAACAAAGATTTGGGGTAAAAGTGACCATTGGACAATGGCA
GTAGGTGTTGCTGTCGTAATTGTCATGATTTTGTTGCTATTTATTCTAAGTGTAGCCTTTCCTAGGATGCGTAAAATTCA
AGGTTTAACCGATAACCTCAATGGAACAACACGTGAAATTCTTAGTGGGATTCGTGTAGTTCGCGCTTATAATGCTGAGG
ATTATCAGGATGCCAAATTTAACAAAGAAAATATTGCTTTAACGAACCTCAACTTATTTGTCAATCGTATTATGGCATTA
ATGAATCCTGTCATGACAGTGGTTTCAAGTGGTTTAACACTTGTTATTTATTGGATTGGTGTTCATTTAATTGATGATGT
GACAATTTCAAAAACAAGCATGGCCTTAGCTATGTCTAATGTAAAAGAACGTGTTTCAATCTTTAGTGATATGGTTGTAT
TCTCATCTTATGCAATGCAGGTTATCATGGGCTTCATGATGATGGTGGCCATATTCATTATCTTACCACGTGCGATGGTT
TCTGCTGGCCGTATCAATGAAGTGCTAGCACTAAAACCTTCTGTCAACTTTTCAGAAGAAAAAGCTCATGAGAGTGTAGA
AAAAGGTTCTATTTCATTCCAAGACGTTTCATTCCGTTATGTTAAAGAATCGAAAGATGTCATAGAACATGTTTCTTTTG
AGGCTAAGGCTGGTCAGACTGTCGCATTTATTGGCTCAACTGGTTCTGGTAAATCAACACTTGTAAACTTGATACCACGC
CTTTATGATGTTACTCAGGGTGCCATTTTAGTTGATGGTATTAATATCAAAGACTATTCACATCAAGAATTGAACAATAA
AGTCGGATATATTCCACAAAAAGCAGTGCTCTTTAGTGGTACAGTCCGTTCTAATATGAATTTTGGTCAAAGTCAACAAG
GTCACATAAATGATGCTGCTATTTGGGATGCTCTAGAATTAGCTCAAGCTAAAGACTTTATTGAAGGGAATGAAAAAGGT
CTGGATGCTACAGTTTCTCAAGGTGGGAACAACTTTTCTGGAGGTCAAAAGCAACGTTTAGCAATTGCTCGAGCTTTAGC
ACGTAAACCAGAAATCCTTATTTTTGATGATTCATTTTCAGCCTTAGACTATAAAACGGATCGTCAACTACGTTATGATT
TGAGTCAAAAAACGAAAGAAATGACTAAGATTATTGTGGCACAACGCATTTCAACTATTATGGATGCCGATTTAATTTTG
GTTTTAGATGAAGGTAAAGTTGTGGGTCAAGGAACTCATAAAGAATTGTTAGCAGAAAATTCTGTTTATCAAGAAATCGC
TTATTCACAACTTTCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KE76

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

77.333

100

0.773

Multiple sequence alignment