Detailed information NTG1112504

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: KHO06_RS22800
• Genome accession: NZ_HG992752
• Coordinates: 1360470..1361771 (+)
• Length: 433 a.a.
• NCBI ID: WP_256859669.1
• Uniprot ID: -
• Organism: Vibrio sp. B1FIG11 isolate LMG10946-nano
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1355470..1366771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHO06_RS22790 (ACOMICROBIO_LOCUS4168)	-	1357930..1358916 (+)	987	WP_212582588.1	peptidoglycan DD-metalloendopeptidase family protein	-
KHO06_RS22795 (ACOMICROBIO_LMKGKHOH_03381)	ylqF	1359237..1360181 (+)	945	WP_038891693.1	ribosome biogenesis GTPase YlqF	-
KHO06_RS22800 (ACOMICROBIO_LOCUS4169)	cqsA	1360470..1361771 (+)	1302	WP_256859669.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
KHO06_RS22805 (ACOMICROBIO_LOCUS4170)	cqsS	1361878..1363923 (-)	2046	WP_212583425.1	hybrid sensor histidine kinase/response regulator	Regulator
KHO06_RS22810 (ACOMICROBIO_LMKGKHOH_03384)	-	1364227..1364844 (+)	618	WP_038891692.1	HAD family phosphatase	-
KHO06_RS22815 (ACOMICROBIO_LOCUS4171)	-	1364919..1365467 (-)	549	WP_005426812.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 433 a.a.
• Molecular weight: 48881.78 Da
• Isoelectric Point: 6.3997

>NTDB_id=1112504 KHO06_RS22800 WP_256859669.1 1360470..1361771(+) (cqsA) [Vibrio sp. B1FIG11 isolate LMG10946-nano]
MRSLQAHANLCNLTNDTELILVKLYNCQRWRFPVLRRELIMSDKPKTKPLPSFVEERLDFYIQDLIEQNENQKHLVLGKR
PQQGAVVMQSNDYLSLSHNLQIQQAHRDAIYEHDDNVVMSAIFLQDDDSKPAFETQLADYVGMGSCLLSQSGWAANIGLL
QTICPPETPVYIDFFAHMSLWEGIRAAGAQAHPFMHNNMNHLRKQIQRHGSGVIVVDSVYSTIGTIAPLHDIYEMAREFD
CALVVDESHSLGTHGPNGSGLVKALELTDQVDFITVSLAKTFAYRAGAILGPEKLARTLPFVAFPAIFSSTVLPQEIVRL
EKTLEVIRSADDKRTMLFNRAKELRTGLKQIGFHIRSESQIVALECGSERNTERVRDFLEERNVFGAVFCRPATGKNKNI
IRFSINADMTSRDIDHVLTACQEAYNHPELEFA

Nucleotide

• Length: 1302 bp

>NTDB_id=1112504 KHO06_RS22800 WP_256859669.1 1360470..1361771(+) (cqsA) [Vibrio sp. B1FIG11 isolate LMG10946-nano]
ATGCGGAGTTTGCAGGCGCACGCAAACTTATGCAACTTGACTAATGACACCGAGCTCATATTGGTCAAACTATATAACTG
TCAGCGCTGGCGTTTTCCTGTGTTACGAAGAGAACTTATTATGAGTGATAAACCGAAAACAAAACCACTTCCTTCCTTTG
TTGAGGAACGCCTAGACTTTTATATTCAAGATCTGATTGAGCAGAACGAAAACCAAAAGCACTTGGTATTAGGGAAGCGA
CCACAACAAGGAGCGGTGGTCATGCAAAGTAACGACTACTTGTCGTTGTCCCACAATCTACAAATTCAACAGGCACATCG
TGATGCTATCTACGAGCACGATGATAACGTTGTCATGTCTGCGATTTTCTTACAAGATGACGACTCAAAACCTGCATTTG
AAACGCAGCTCGCGGATTATGTCGGTATGGGCAGTTGCCTATTATCCCAGTCCGGATGGGCAGCCAATATTGGCTTGTTA
CAAACGATTTGTCCGCCAGAAACACCGGTCTATATCGATTTCTTTGCACACATGTCTTTGTGGGAAGGGATTCGAGCGGC
AGGAGCGCAAGCGCATCCATTCATGCATAACAACATGAACCATTTGCGCAAGCAGATACAGCGTCACGGCTCTGGCGTTA
TCGTTGTGGATTCGGTCTATAGCACGATAGGTACGATCGCCCCACTCCACGACATCTACGAAATGGCGCGTGAGTTTGAT
TGTGCTTTGGTGGTCGATGAGTCCCACTCATTAGGCACGCATGGGCCAAATGGTTCTGGCTTGGTGAAAGCATTAGAACT
CACTGATCAAGTGGATTTCATTACGGTGAGTTTGGCAAAAACATTTGCTTATCGGGCTGGCGCGATTCTTGGTCCAGAAA
AGTTGGCTAGAACGCTACCCTTTGTCGCATTCCCAGCCATCTTTAGTTCGACGGTCCTGCCACAAGAGATCGTTCGACTT
GAAAAGACTCTCGAAGTCATTAGAAGCGCAGATGATAAGCGAACCATGCTGTTCAATCGCGCTAAGGAGCTCAGAACAGG
CCTAAAGCAGATTGGCTTTCATATCCGCAGCGAATCGCAAATTGTGGCGTTAGAATGCGGTAGTGAGCGAAATACGGAAC
GAGTACGTGACTTCTTAGAAGAACGAAACGTGTTTGGCGCTGTATTCTGTCGTCCTGCAACGGGCAAGAATAAGAACATT
ATTCGATTTTCGATCAATGCTGATATGACATCTCGTGACATTGACCATGTCTTGACGGCTTGTCAGGAAGCGTATAACCA
CCCAGAACTAGAATTCGCCTAA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (87-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	57.179	90.069	0.515