Detailed information NTG1112434

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: KHN79_RS10840
• Genome accession: NZ_HG992749
• Coordinates: 2394681..2398067 (+)
• Length: 1128 a.a.
• NCBI ID: WP_182008807.1
• Uniprot ID: -
• Organism: Vibrio sp. B1FLJ16
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2389681..2403067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHN79_RS10820 (ACOMICROBIO_LOCUS1585)	erpA	2389926..2390267 (-)	342	WP_182008803.1	iron-sulfur cluster insertion protein ErpA	-
KHN79_RS10825 (ACOMICROBIO_LOCUS1586)	hemL	2390643..2391938 (+)	1296	WP_182008804.1	glutamate-1-semialdehyde 2,1-aminomutase	-
KHN79_RS10830 (ACOMICROBIO_FLGHMIGD_02193)	-	2392267..2393352 (+)	1086	WP_182008805.1	AI-2E family transporter	-
KHN79_RS10835 (ACOMICROBIO_LOCUS1587)	rsmC	2393437..2394462 (+)	1026	WP_182008806.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
KHN79_RS10840 (ACOMICROBIO_LOCUS1588)	chiS	2394681..2398067 (+)	3387	WP_182008807.1	response regulator	Regulator
KHN79_RS10845 (ACOMICROBIO_LOCUS1589)	-	2398958..2400640 (+)	1683	WP_182008808.1	ABC transporter substrate-binding protein	-
KHN79_RS10850 (ACOMICROBIO_LOCUS1590)	-	2400811..2401797 (+)	987	WP_182008809.1	ABC transporter permease	-
KHN79_RS10855 (ACOMICROBIO_LOCUS1591)	-	2401800..2402825 (+)	1026	WP_182008810.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127589.13 Da
• Isoelectric Point: 5.7831

>NTDB_id=1112434 KHN79_RS10840 WP_182008807.1 2394681..2398067(+) (chiS) [Vibrio sp. B1FLJ16]
MFKFYKKQKFKRLQSTLMTAFLVVSLTPLTITAIFFLHAHSQDLQEQSTSHLLSVRETKQQQIADYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFNRLGNDIEESRENAQQRYIEGSGDQIKTSILPESSNFVGSERYRLLHKRYHWSYTELLKRSDF
RDILLVDINGNVTYSIKKDDNYGTNLLSGRYKDSALGKAFQRLSEDVTERRKVNEDYTPVIVSDFELENGKQVAWLGAPI
VQQGYLHSYAMFSLPSNGITKLIADQNRESSIETLLVGSDHKPRTINTKQDNIQNSLEVIEQALSGNKSVGTYSNGLGEK
IIAAYSPIKARGMNWALVVQLPEKEAFSRIHQLEKLFVIAMLTAFILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TRFNTERKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGAVPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASSTQLVLELSSHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISASVVDEYVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDET
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEVVASKTLAARGHFQIPEININNTDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTASDGPETLELIEQEKPELLLLDIMMPGMSGYQVCSELRQTYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAQVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQIKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSSYAFDGDRDQLQKLKELGGEFTRLADKALGNKKDKQDLMREVLVDVMTHA
LEYWESATGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1112434 KHN79_RS10840 WP_182008807.1 2394681..2398067(+) (chiS) [Vibrio sp. B1FLJ16]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGCCTTCAAAGTACGCTGATGACTGCGTTTCTTGTCGTCAGTCTCAC
GCCTTTAACCATTACCGCAATTTTCTTCCTGCACGCTCACAGCCAGGATCTGCAAGAACAGAGCACATCACACCTGCTTT
CTGTGCGAGAGACTAAACAACAACAAATTGCTGATTACTTCGAAGCTCGGGAAACTGAAGTAATGGGCTTTGTACGCTCT
GAATTAGCCTACGCCAGTGGCGGACGTTTTTACGGTCTGGTCAATGCATTTAACCGCTTAGGCAACGATATTGAGGAGTC
TCGTGAAAATGCACAGCAACGCTATATTGAAGGCAGCGGCGACCAAATAAAAACATCAATTTTGCCGGAGTCTTCCAACT
TTGTCGGTAGTGAACGTTACCGGCTATTACACAAACGCTATCACTGGTCTTATACAGAACTGCTCAAACGCTCGGACTTC
AGAGATATTTTGCTGGTCGATATCAACGGCAATGTGACCTATTCGATCAAGAAAGACGACAATTACGGTACTAACCTCCT
ATCTGGCCGATATAAAGATTCAGCGCTGGGCAAAGCGTTTCAGCGTTTGTCTGAAGATGTAACTGAACGCCGTAAAGTGA
ATGAGGACTACACGCCTGTAATTGTCTCAGATTTTGAGCTGGAAAATGGTAAACAAGTCGCTTGGTTAGGAGCGCCGATC
GTTCAGCAAGGCTACCTGCATAGCTATGCCATGTTCAGCTTGCCGAGTAATGGCATCACTAAACTGATTGCCGATCAGAA
CCGGGAATCCTCCATCGAAACTTTGCTCGTCGGAAGCGATCATAAGCCCAGAACGATTAACACCAAACAAGATAATATCC
AAAACAGCCTGGAGGTTATTGAGCAGGCACTTTCAGGAAACAAGAGCGTAGGGACATATTCAAATGGATTAGGTGAAAAG
ATCATTGCCGCCTACTCGCCAATTAAAGCTCGTGGAATGAACTGGGCTCTGGTGGTTCAGCTACCAGAAAAAGAAGCCTT
TTCTCGTATTCATCAGTTAGAAAAACTGTTCGTCATTGCGATGTTGACGGCATTTATTCTGGTGGTCATTGCCTCTCATT
ACTTATCTAACTTCATCACTTCTCCGTTACTGAAATTAACCTGGGCTGCAGAGCGGGTATCTGCCGGTGATCTTGACGAA
ACAAGATTCAATACCGAACGTAAAGACGAAATTGGACGATTAGCTATTAGCTTTGAGCGTATGCAACGATCAATTCGTGA
AAAAATCCAGACCATCAAGAAGCAAAACGAAGAGCTGGAAAGTAATATCCGCCTGATTCAGAAACAGAATGAGGAGCTGC
AACTTGCCGATAAACTCAAAGATGAGTTTCTGGCAACGACCTCCCATGAGCTAAGAACACCTTTACATGGCATGGTCGGT
ATTGCAGAGACTTTAATCTCCGGTGCGAATGGTGCCGTTCCTGCGAGCCAAAAGTACCAGCTTGATATCATTATTAAAAG
TGGTCAGCGCTTGGCCAATCTTGTTGATGACTTGCTGGATTACCACAAAATGCGCTATGGCAGCATGGACATACAAAAAT
CCGCTGTCAGTCTGGCAAGCTCTACGCAACTGGTGCTTGAGCTATCGAGCCATCTGCTCGGCAATAAAACCATCCGCATA
ATTAACCAGGTGCCTAATGATCTAAAAGCGGTATCCGCAGATCCACAACGGCTTGAGCAGGTTCTTTACAACCTGATCGG
TAACGCAATCAAATACACTTCAGAGGGAAAAATTGTCATTTCTGCCAGTGTGGTTGACGAATATGTCCGGGTTCAGGTCG
TCGATACCGGTCAGGGTATCCCCGCAGAACACCTTGAACACATCTTCGAGCCCTTAATTCAGGCCGGACAAGATGAGACT
CGCTACCGCCAGGGTGCTGGATTAGGCCTGTCTATCAGCCGCCAGTTAATTGAGCTGATGGGTGGTTCACTGTATGTCAG
CAGTCAACCAATGGTAGGTACCACCTTTAGTTTCACGCTTCCGCTGGCCAGTGAAGAAGAGGTCGTGGCCTCGAAGACTC
TAGCTGCCCGTGGCCATTTCCAGATACCTGAAATCAACATAAACAATACAGATGATCTGTCTTTGCCTGAAAACCCGGAC
GGCCCGCTTCTGTATGTAGCCGACGATGAGCCGGTAAACCTTCGCGTACTTGAAAGCTTTTTACGCCTGGAAGGCTACCG
GGTCCGCACGGCTTCAGACGGGCCTGAAACACTGGAACTCATTGAACAGGAGAAACCAGAGCTTCTGCTACTTGATATTA
TGATGCCGGGGATGAGTGGCTATCAGGTGTGTAGCGAATTGCGCCAGACCTATGACCATGCTGAACTGCCAATCATCATG
CTGACCGCGCTGAGCCAGACCGAAGATCGCGTCAGAGGGTTCGAAGCCGGAGCAAATGATTACCTATCCAAGCCGTTTAA
CAAACAAGAACTCGCGGCGCGAATTCAGGCACATTTAACCGCAAGCAAAGCGGAAATGCGCCATATCGAAAACAAGTTAC
TCGAATCTGAACTTCGTCAACGAGCACAAGTAGAAGCAAGCCTGCTCGAAACTCAGGGCCGCCTGCTCGAACAACTGGAG
TCAGCACCTGAAGCCATAATCTGCTTACGCGAAGACCAGCGAATCCGATTTGCCAACGAAGCCGCATGCAAGCTATTCAA
GCGCAGTTTAGAGCAAATAAAACGCTCTTCTGCCGATGAACTGATTGCGCCTAAATATCTGACTGTCAAGCAGCCACATT
ACTGCGGAAAAATTGATATTTACATTGAGGATATTCGTCAGAATATTGAAGCGGATATTCTTAAGTTACCTGAAGGATCC
GGTCTGGACGTTATGTACATCTTTAATGTCGGCGGTGGCGCGAACACCGCTCGTATACATAACCTGGAAACTGCGGTAGA
AGTTCTTTCAAGTTACGCATTCGACGGTGACCGAGATCAGCTGCAGAAACTGAAAGAACTGGGGGGCGAGTTCACTCGTT
TAGCAGACAAAGCACTAGGCAACAAAAAAGACAAGCAGGATCTGATGCGCGAGGTGTTGGTAGATGTAATGACGCACGCT
CTTGAATACTGGGAGTCCGCAACCGGAGAAAGTAAGTTTGCCTTTGCTGAACAAAGTGGCCTGTGGCGGGTGTACCTTGA
CCGGAGCACCCTACAAACACGTACTTTAGATAAGTACATGAGAATCGAGACATTGCCTAAAACACCGCGCTGGAGAACGG
TTCTGAGTTCAATCGAATACATTCTCGAACATTGCAAAGAGCAAAGCCCGGAACGCGCTTATATTGAAGCTCAGCGCGAC
AAGTTACAAAGGTTGCTAACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.199	100	0.753