Detailed information NTG0111224

Bioinformatically predicted

Overview

• Name: comO
• Type: Machinery gene
• Locus tag: ACMCNJ_RS09665
• Genome accession: NZ_AP038788
• Coordinates: 2114884..2115588 (-)
• Length: 234 a.a.
• NCBI ID: WP_226692716.1
• Uniprot ID: -
• Organism: Rodentibacter sp. THUN1656
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2109884..2120588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMCNJ_RS09645 (THUN1656_18330)	nrdR	2109974..2110423 (-)	450	WP_226692719.1	transcriptional regulator NrdR	-
ACMCNJ_RS09650 (THUN1656_18340)	recC	2110482..2113880 (-)	3399	WP_226692718.1	exodeoxyribonuclease V subunit gamma	-
ACMCNJ_RS09655 (THUN1656_18350)	comQ	2113924..2114199 (-)	276	WP_226692717.1	DUF5374 domain-containing protein	Machinery gene
ACMCNJ_RS09660 (THUN1656_18360)	comP	2114204..2114887 (-)	684	WP_226692981.1	DUF2572 family protein	Machinery gene
ACMCNJ_RS09665 (THUN1656_18370)	comO	2114884..2115588 (-)	705	WP_226692716.1	type II secretion system protein J	Machinery gene
ACMCNJ_RS09670 (THUN1656_18380)	comN	2115593..2116108 (-)	516	WP_226692715.1	type II secretion system protein	Machinery gene
ACMCNJ_RS09675 (THUN1656_18390)	suhB	2116307..2117110 (+)	804	WP_226692714.1	inositol-1-monophosphatase	-
ACMCNJ_RS09680 (THUN1656_18400)	-	2117237..2118130 (+)	894	WP_226692713.1	Fe(3+) dicitrate ABC transporter substrate-binding protein	-
ACMCNJ_RS09685 (THUN1656_18410)	fecC	2118130..2119122 (+)	993	WP_226692712.1	iron-dicitrate ABC transporter permease FecC	-
ACMCNJ_RS09690 (THUN1656_18420)	fecD	2119167..2120102 (+)	936	WP_374707306.1	Fe(3+) dicitrate ABC transporter permease subunit FecD	-

Sequence

Protein

• Length: 234 a.a.
• Molecular weight: 26374.35 Da
• Isoelectric Point: 7.9280

>NTDB_id=111224 ACMCNJ_RS09665 WP_226692716.1 2114884..2115588(-) (comO) [Rodentibacter sp. THUN1656]
MLKGQTLLSLMISLAISAALLFVISQFYVDTQIQNQKIFLRLKLQAEIQRTIQLIGKDLRRAGFRALNDKLIESNLNLFE
LDEKGSALIISQANNAAQNSCVLFFYDLDANGCIGEKYTKNTCINGNQNVAKGIEKELFGYKLNGKMIETKQTYKNTIKV
NCQFGECQKALQQSACNAGGGWTDLLDEKEYEITHLQFNRFAEGKGIEIRLGGNLKNYPEIHYETAMVVALWNQ

Nucleotide

• Length: 705 bp

>NTDB_id=111224 ACMCNJ_RS09665 WP_226692716.1 2114884..2115588(-) (comO) [Rodentibacter sp. THUN1656]
ATGTTAAAAGGGCAAACTTTACTTAGCCTAATGATTTCATTGGCAATTTCTGCCGCACTTTTATTCGTGATTTCACAATT
TTATGTGGATACGCAAATTCAAAATCAGAAAATCTTTTTACGTTTAAAATTACAGGCGGAAATTCAACGTACGATCCAAC
TTATCGGCAAAGATCTGCGCCGTGCCGGTTTTCGGGCTCTCAACGATAAATTAATTGAAAGTAATCTGAATTTGTTTGAA
TTAGATGAAAAGGGAAGTGCTTTGATAATTTCTCAGGCGAATAATGCCGCTCAAAATAGCTGTGTTTTGTTCTTTTATGA
TCTTGATGCAAATGGTTGTATCGGTGAAAAATACACTAAAAATACTTGTATCAATGGCAATCAAAATGTCGCAAAAGGTA
TCGAAAAAGAACTTTTCGGTTATAAATTGAATGGCAAAATGATCGAAACCAAGCAAACCTATAAAAATACAATTAAGGTA
AATTGTCAATTCGGTGAATGTCAAAAAGCACTTCAACAAAGTGCCTGTAATGCCGGAGGTGGTTGGACGGATTTACTGGA
CGAAAAGGAATATGAAATTACCCATCTGCAATTTAATCGTTTCGCAGAAGGAAAAGGGATAGAAATTCGGCTCGGCGGTA
ATTTAAAAAATTATCCGGAGATTCACTATGAAACCGCTATGGTGGTGGCACTTTGGAATCAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comO	Haemophilus influenzae Rd KW20	64.53	100	0.645