Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   HMPREF9319_RS01470 Genome accession   NZ_GL397128
Coordinates   294623..295348 (+) Length   241 a.a.
NCBI ID   WP_003063393.1    Uniprot ID   -
Organism   Streptococcus equinus ATCC 700338     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 289623..300348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS01440 (HMPREF9319_0285) - 290001..291422 (+) 1422 WP_003063382.1 NCS2 family permease -
  HMPREF9319_RS01445 (HMPREF9319_0286) tsaE 291606..292049 (+) 444 WP_003063385.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  HMPREF9319_RS01450 (HMPREF9319_0287) - 292042..292554 (+) 513 WP_003063386.1 GNAT family N-acetyltransferase -
  HMPREF9319_RS01455 (HMPREF9319_0288) brpA 292565..293722 (+) 1158 WP_003063388.1 biofilm formation/cell division transcriptional regulator BrpA -
  HMPREF9319_RS01460 (HMPREF9319_0289) - 293841..294143 (-) 303 WP_003063390.1 hypothetical protein -
  HMPREF9319_RS01465 (HMPREF9319_0290) - 294140..294559 (-) 420 WP_003063392.1 HIT family protein -
  HMPREF9319_RS01470 (HMPREF9319_0291) pptA 294623..295348 (+) 726 WP_003063393.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS01475 (HMPREF9319_0292) - 295350..296384 (+) 1035 WP_003063395.1 ABC transporter permease -
  HMPREF9319_RS01480 (HMPREF9319_0293) ccrZ 296449..297243 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  HMPREF9319_RS01485 (HMPREF9319_0294) trmB 297243..297881 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HMPREF9319_RS11385 - 298407..298884 (+) 478 Protein_287 hypothetical protein -
  HMPREF9319_RS01495 (HMPREF9319_0297) rimP 299137..299622 (+) 486 WP_172456429.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26711.04 Da        Isoelectric Point: 4.4206

>NTDB_id=1111672 HMPREF9319_RS01470 WP_003063393.1 294623..295348(+) (pptA) [Streptococcus equinus ATCC 700338]
MLKIENITGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDCFVILHQGKIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1111672 HMPREF9319_RS01470 WP_003063393.1 294623..295348(+) (pptA) [Streptococcus equinus ATCC 700338]
ATGTTAAAAATTGAAAATATAACAGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGATGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATTGGGCTCTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGAATCAGGCAGAATATCGTAAGAAAATTGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAATTGACTTTACGTGAACATTTAGAAACAGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCAATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTTAATCCAAGTTTGTTTATCGTTGATGAGCCCTTT
TTGGGCTTGGACCCATTAGCAATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACTGTTTTGTGATTTTGCATCAAGGGAAAATTCGTGCAACTG
GTACATTAGCAGAGCTACGTGAAGCATTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

78.661

99.17

0.78
  pptA Streptococcus thermophilus LMD-9

78.243

99.17

0.776

Multiple sequence alignment