Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACODFA_RS29320 | Genome accession | NZ_CP184642 |
| Coordinates | 6192253..6192810 (+) | Length | 185 a.a. |
| NCBI ID | WP_003094697.1 | Uniprot ID | A0A6N0KGD7 |
| Organism | Pseudomonas aeruginosa strain 0211 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6187253..6197810
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACODFA_RS29300 (ACODFA_29300) | pilR | 6188529..6189866 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ACODFA_RS29305 (ACODFA_29305) | thiO | 6189912..6191006 (-) | 1095 | WP_003094695.1 | glycine oxidase ThiO | - |
| ACODFA_RS29310 (ACODFA_29310) | - | 6191141..6191650 (+) | 510 | WP_015503652.1 | GspH/FimT family pseudopilin | - |
| ACODFA_RS29315 (ACODFA_29315) | - | 6191756..6192262 (+) | 507 | WP_003094696.1 | GspH/FimT family pseudopilin | - |
| ACODFA_RS29320 (ACODFA_29320) | pilV | 6192253..6192810 (+) | 558 | WP_003094697.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACODFA_RS29325 (ACODFA_29325) | pilW | 6192807..6193631 (+) | 825 | WP_003094698.1 | type 4a pilus minor pilin PilW | - |
| ACODFA_RS29330 (ACODFA_29330) | pilX | 6193628..6194215 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| ACODFA_RS29335 (ACODFA_29335) | pilY1 | 6194227..6197718 (+) | 3492 | WP_003094704.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20069.21 Da Isoelectric Point: 8.2164
>NTDB_id=1110432 ACODFA_RS29320 WP_003094697.1 6192253..6192810(+) (pilV) [Pseudomonas aeruginosa strain 0211]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1110432 ACODFA_RS29320 WP_003094697.1 6192253..6192810(+) (pilV) [Pseudomonas aeruginosa strain 0211]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |