Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACOCI8_RS05435 | Genome accession | NZ_CP184563 |
| Coordinates | 1125423..1125818 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SCTW2018065 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1120423..1130818
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCI8_RS05410 (ACOCI8_05410) | - | 1121592..1121996 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACOCI8_RS05415 (ACOCI8_05415) | - | 1122649..1122882 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACOCI8_RS05420 (ACOCI8_05420) | murA | 1122993..1124258 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACOCI8_RS05425 (ACOCI8_05425) | fabZ | 1124292..1124732 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACOCI8_RS05430 (ACOCI8_05430) | - | 1124789..1125229 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ACOCI8_RS05435 (ACOCI8_05435) | ssb | 1125423..1125818 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACOCI8_RS05440 (ACOCI8_05440) | sceD | 1126207..1126902 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| ACOCI8_RS05445 (ACOCI8_05445) | tenA | 1127289..1127978 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| ACOCI8_RS05450 (ACOCI8_05450) | thiD | 1127971..1128801 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACOCI8_RS05455 (ACOCI8_05455) | thiM | 1128785..1129576 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| ACOCI8_RS05460 (ACOCI8_05460) | thiE | 1129578..1130219 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1109571 ACOCI8_RS05435 WP_000932694.1 1125423..1125818(+) (ssb) [Staphylococcus aureus strain SCTW2018065]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1109571 ACOCI8_RS05435 WP_000932694.1 1125423..1125818(+) (ssb) [Staphylococcus aureus strain SCTW2018065]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |