Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACOCJB_RS13970 | Genome accession | NZ_CP184557 |
| Coordinates | 2796967..2797362 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SCTW2018482 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2791967..2802362
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCJB_RS13945 (ACOCJB_13945) | - | 2793136..2793540 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACOCJB_RS13950 (ACOCJB_13950) | - | 2794193..2794426 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACOCJB_RS13955 (ACOCJB_13955) | murA | 2794537..2795802 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACOCJB_RS13960 (ACOCJB_13960) | fabZ | 2795836..2796276 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACOCJB_RS13965 (ACOCJB_13965) | - | 2796333..2796773 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ACOCJB_RS13970 (ACOCJB_13970) | ssb | 2796967..2797362 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACOCJB_RS13975 (ACOCJB_13975) | sceD | 2797751..2798446 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| ACOCJB_RS13980 (ACOCJB_13980) | tenA | 2798833..2799522 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| ACOCJB_RS13985 (ACOCJB_13985) | thiD | 2799515..2800345 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACOCJB_RS13990 (ACOCJB_13990) | thiM | 2800329..2801120 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| ACOCJB_RS13995 (ACOCJB_13995) | thiE | 2801122..2801763 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1109474 ACOCJB_RS13970 WP_000932694.1 2796967..2797362(+) (ssb) [Staphylococcus aureus strain SCTW2018482]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1109474 ACOCJB_RS13970 WP_000932694.1 2796967..2797362(+) (ssb) [Staphylococcus aureus strain SCTW2018482]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |