Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACOCJC_RS10305 Genome accession   NZ_CP184549
Coordinates   2081005..2081877 (-) Length   290 a.a.
NCBI ID   WP_000620182.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SCTW2019145     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2076005..2086877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCJC_RS10295 (ACOCJC_10295) trmFO 2077293..2078600 (-) 1308 WP_158109038.1 FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO -
  ACOCJC_RS10300 (ACOCJC_10300) topA 2078756..2080831 (-) 2076 WP_001807811.1 type I DNA topoisomerase -
  ACOCJC_RS10305 (ACOCJC_10305) dprA 2081005..2081877 (-) 873 WP_000620182.1 DNA-processing protein DprA Machinery gene
  ACOCJC_RS10310 (ACOCJC_10310) fmhC 2082048..2083291 (-) 1244 Protein_1986 FemA/FemB family glycyltransferase FmhC -
  ACOCJC_RS10315 (ACOCJC_10315) - 2083319..2083471 (-) 153 Protein_1987 cell wall hydrolase -
  ACOCJC_RS10320 (ACOCJC_10320) - 2083475..2083531 (-) 57 Protein_1988 YSIRK-type signal peptide-containing protein -
  ACOCJC_RS10325 (ACOCJC_10325) sucD 2083758..2084666 (-) 909 WP_000110258.1 succinate--CoA ligase subunit alpha -
  ACOCJC_RS10330 (ACOCJC_10330) sucC 2084688..2085854 (-) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  ACOCJC_RS10335 (ACOCJC_10335) - 2085963..2086730 (-) 768 WP_000176395.1 ribonuclease HII -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33534.97 Da        Isoelectric Point: 9.6076

>NTDB_id=1109330 ACOCJC_RS10305 WP_000620182.1 2081005..2081877(-) (dprA) [Staphylococcus aureus strain SCTW2019145]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=1109330 ACOCJC_RS10305 WP_000620182.1 2081005..2081877(-) (dprA) [Staphylococcus aureus strain SCTW2019145]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.966

100

0.99
  dprA Staphylococcus aureus N315

98.621

100

0.986

Multiple sequence alignment