Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACOCJC_RS05770 | Genome accession | NZ_CP184549 |
| Coordinates | 1190278..1190673 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SCTW2019145 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1185278..1195673
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCJC_RS05745 (ACOCJC_05745) | - | 1186506..1186910 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACOCJC_RS05750 (ACOCJC_05750) | - | 1187504..1187737 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACOCJC_RS05755 (ACOCJC_05755) | murA | 1187848..1189113 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACOCJC_RS05760 (ACOCJC_05760) | fabZ | 1189147..1189587 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACOCJC_RS05765 (ACOCJC_05765) | - | 1189644..1190084 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ACOCJC_RS05770 (ACOCJC_05770) | ssb | 1190278..1190673 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACOCJC_RS05775 (ACOCJC_05775) | sceD | 1191062..1191757 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| ACOCJC_RS05780 (ACOCJC_05780) | tenA | 1192144..1192833 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| ACOCJC_RS05785 (ACOCJC_05785) | thiD | 1192826..1193656 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACOCJC_RS05790 (ACOCJC_05790) | thiM | 1193640..1194431 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| ACOCJC_RS05795 (ACOCJC_05795) | thiE | 1194433..1195074 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1109305 ACOCJC_RS05770 WP_000932694.1 1190278..1190673(+) (ssb) [Staphylococcus aureus strain SCTW2019145]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1109305 ACOCJC_RS05770 WP_000932694.1 1190278..1190673(+) (ssb) [Staphylococcus aureus strain SCTW2019145]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |