Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACOCJG_RS13320 | Genome accession | NZ_CP184545 |
| Coordinates | 2702645..2703040 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CBTW2022135 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2697645..2708040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCJG_RS13295 (ACOCJG_13295) | - | 2698814..2699218 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACOCJG_RS13300 (ACOCJG_13300) | - | 2699871..2700104 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACOCJG_RS13305 (ACOCJG_13305) | murA | 2700215..2701480 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACOCJG_RS13310 (ACOCJG_13310) | fabZ | 2701514..2701954 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACOCJG_RS13315 (ACOCJG_13315) | - | 2702011..2702451 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ACOCJG_RS13320 (ACOCJG_13320) | ssb | 2702645..2703040 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACOCJG_RS13325 (ACOCJG_13325) | sceD | 2703429..2704124 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| ACOCJG_RS13330 (ACOCJG_13330) | tenA | 2704511..2705200 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| ACOCJG_RS13335 (ACOCJG_13335) | thiD | 2705193..2706023 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACOCJG_RS13340 (ACOCJG_13340) | thiM | 2706007..2706798 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| ACOCJG_RS13345 (ACOCJG_13345) | thiE | 2706800..2707441 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1109251 ACOCJG_RS13320 WP_000932694.1 2702645..2703040(+) (ssb) [Staphylococcus aureus strain CBTW2022135]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1109251 ACOCJG_RS13320 WP_000932694.1 2702645..2703040(+) (ssb) [Staphylococcus aureus strain CBTW2022135]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |