Detailed information NTG0110856

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: ID09_RS04825
• Genome accession: NZ_CP008921
• Coordinates: 989902..990972 (+)
• Length: 356 a.a.
• NCBI ID: WP_024381847.1
• Uniprot ID: -
• Organism: Streptococcus suis 6407
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 984902..995972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID09_RS04800 (ID09_04925)	-	985628..985960 (+)	333	WP_002935001.1	putative DNA-binding protein	-
ID09_RS04805 (ID09_04930)	ffh	985973..987547 (+)	1575	WP_024381843.1	signal recognition particle protein	-
ID09_RS04810 (ID09_04935)	-	987741..988409 (+)	669	WP_024381844.1	SatD family protein	-
ID09_RS04815 (ID09_04940)	-	988413..989153 (+)	741	WP_024390638.1	DUF3307 domain-containing protein	-
ID09_RS04820 (ID09_04945)	-	989213..989734 (+)	522	WP_024387749.1	AAA family ATPase	-
ID09_RS04825 (ID09_04950)	xerS	989902..990972 (+)	1071	WP_024381847.1	tyrosine recombinase XerS	Machinery gene
ID09_RS04830 (ID09_04955)	-	991042..992550 (-)	1509	WP_024390639.1	phosphoglucomutase	-
ID09_RS04835 (ID09_04960)	-	992626..993567 (-)	942	WP_002935009.1	sensor histidine kinase	-
ID09_RS04840 (ID09_04965)	braR	993564..994232 (-)	669	WP_024381849.1	response regulator transcription factor	Regulator
ID09_RS04845 (ID09_04970)	-	994271..994477 (-)	207	WP_371318546.1	type II toxin-antitoxin system RelE family toxin	-
ID09_RS04850 (ID09_04975)	relB	994518..994757 (-)	240	WP_024381851.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41574.80 Da
• Isoelectric Point: 9.2257

>NTDB_id=110856 ID09_RS04825 WP_024381847.1 989902..990972(+) (xerS) [Streptococcus suis 6407]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVTVERIADIPLDILEHLTKKDME
AFILYLRERPLLNTNTTQNGVSQTTINRTLSALSSLFKYLTEEVENELGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=110856 ID09_RS04825 WP_024381847.1 989902..990972(+) (xerS) [Streptococcus suis 6407]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAATC
AAAATTGGCTGTGCCTTACAGTTTTACAACCTTGTATGAATACTTGAAAGAATACCGTCGTTTTTTTGAGTGGTTGCAGG
ATTCAGATTTGGTCACTGTTGAACGGATTGCTGACATTCCGCTGGATATTCTGGAACATTTGACCAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCCTGCTGAACACCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCTGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTGTCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCAGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCAATTCTGGCTCTTCTCTTGGCATCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGATTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
AGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCCAATCGTATCGACGCTTCTTCTATTGAAAAAATGGTTGCGA
AATATTCTGCGGACTTCAAGATACGTGTGACACCCCACAAACTCCGTCACACGCTGGCAACTCGCCTCTATGACGCCACC
AAGTCGCAAGTTCTGGTCAGTCACCAACTGGGCCATGCCAATACCCAAGTCACTGACCTCTATACTCATATCGTCAACGA
TGAGCAAAAAAATGCTCTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.303	100	0.823