Detailed information NTG0110851

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: ID09_RS04035
• Genome accession: NZ_CP008921
• Coordinates: 842616..845882 (+)
• Length: 1088 a.a.
• NCBI ID: WP_024381782.1
• Uniprot ID: -
• Organism: Streptococcus suis 6407
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 837616..850882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID09_RS12155 (ID09_04080)	-	838042..838206 (+)	165	WP_024381780.1	hypothetical protein	-
ID09_RS04030 (ID09_04085)	-	838571..842326 (+)	3756	WP_038425653.1	MucBP domain-containing protein	-
ID09_RS04035 (ID09_04090)	rexB	842616..845882 (+)	3267	WP_024381782.1	ATP-dependent nuclease subunit B	Machinery gene
ID09_RS04040 (ID09_04095)	rexA	845882..849535 (+)	3654	WP_024390763.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
ID09_RS04045 (ID09_04100)	plsY	849545..850189 (-)	645	WP_024381784.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124481.73 Da
• Isoelectric Point: 5.2434

>NTDB_id=110851 ID09_RS04035 WP_024381782.1 842616..845882(+) (rexB) [Streptococcus suis 6407]
MKLVYTDIRNPLTQHLTDTAAEFAKEGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
EGFEHQSKLALLTSLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAMQATYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLDRLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRTFSVNGRADYDAEVIKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGAALLEKFMA
FLEAIGFPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHRIFGNEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATERLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKRLSPQDIGHYKSLLSRLIESERPSLDNEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGEITSKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLQEQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADSRYTEEVLDKIARSSATILRNNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAALDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=110851 ID09_RS04035 WP_024381782.1 842616..845882(+) (rexB) [Streptococcus suis 6407]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACACAGCATTTAACGGATACCGCAGCAGAATTTGCTAAGGAAGG
TAAGCGAGTTTTTTACATTGCTCCAAACTCTCTATCCTTTGAGATGGAACGCAAGGTCTTGGAATACCTGCCAGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCAATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTACAGACAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACTGCTGACTAGCTTGGTAGAAACAGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAGAAAGCTATGCAAGCCACCTATGCGGAAGGCAACGTTTATCAAGCCAAC
GTTGACTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGATAGTAT
CGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGACCAAGAAA
AAATCCAACTCTGGGAGGTTGTTAACCAAAAAGAAGAGGTGGAGCAGGTTGCGACTGCAATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATCTTGTTGCTCTTGGGGGATGTGGATAGCTACAAGTTGCAGATTGGCAAGATTTTTGACAA
GTATGACATTCCTTACTATTTCGGCAAGGCAGAGGAGATGAGTCATCATCCGTTGGTCCATTTTGTGGAGTCCTTGGATC
GCTTGCGTCGCTATCGTTTTCGTGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACCTATTTGAGTCTTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTCTCGAGGACTTTTTCGGTCAA
TGGCAGAGCAGACTATGATGCTGAAGTCATCAAGGAGAAAAGGCTTGTCTATGATTTGAATGTCTTGGAACCTCTACGTG
CTAAGATTATGGAGCCTTTGAACCAGTTGTTTAAGGCTGGACCACAATCTGGAGCAGCCTTGCTTGAGAAATTTATGGCT
TTTTTGGAGGCAATTGGTTTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGTGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATCTTCTCGAGAATTTTCATCGGATTTTCGGAAATGAAAAATTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGAATGCAGGCCAGTCACTATCGTACCGTTCCTGCAACAGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCGCACACTGCAAAGTATGTTTATGCTATCGGAATGGGCCAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACAGAAGAAGAGATGGAAAAAGTCAATCTTGTCTCGGCTAGTTCCTCACGTTTCGATTTGG
TCAGCCGAGAGAATATTAAGAAGAACCATGCTGCTATGATGTCTCTGCTTAATGCTGCGACGGAACGGTTAGTCATTTCA
ACTCCTCAGATTTATAACGAAGGTGAGGATAGTCTCTCCCCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGACGGATAAAAAGACTTAGTCCGCAAGACATCGGCCACTACAAGAGTCTCTTATCCCGTTTGATTGAATCGG
AAAGACCGTCTCTTGATAATGAAGAATGGGAAGGGCAGAGGGCCTTCTGGACAGTCTTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGCGAAATTACTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTATAATAACCAGTATCTTTACTTTG
TCCGTAATGTTCTTCGCCTGCAGGAACAGGAATCCATCCATCCGACTGCCTTTCAGCATGGTTTGTTCTTGCATCGGATT
TTTGAACGAGTAGTCATGGACCAATCTGAGCTAGATTTTGATCAAAAAGTGGACAAGGCCATCCTGCGTACACGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAGGATGCGGATTCTCGTTATACGGAGGAGGTGCTGGATAAGATTGCTCGCTCCA
GTGCGACTATTTTGCGGAATAATGATTTGGTTGAAATTGATGGTCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTAGTT
TTTGACCTTCAAAATGGTAAGAGTGTGCATGTAAATGGTACAATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTAA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGGGCTATGTATTTGCATTTGCAGGAT
CCAATTATCAAATTAAAAGATACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TGTTATTGAACCACAACCAAGAACTCTACAAACAAGCTGCTTTGGATATTCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGACATATGGGTATGGC
ACGGCGGTTGGTCAAAGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1041)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	45.15	100	0.458