Detailed information NTG1108442

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNANG_RS10540
• Genome accession: NZ_CP184479
• Coordinates: 2374347..2375483 (-)
• Length: 378 a.a.
• NCBI ID: WP_420227122.1
• Uniprot ID: -
• Organism: Pigmentiphaga litoralis strain E30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2369347..2380483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNANG_RS10520 (ACNANG_10520)	-	2370142..2370885 (+)	744	WP_420227118.1	amino acid ABC transporter ATP-binding protein	-
ACNANG_RS10525 (ACNANG_10525)	-	2370892..2371806 (+)	915	WP_420227119.1	LysR family transcriptional regulator	-
ACNANG_RS10530 (ACNANG_10530)	-	2371920..2372903 (+)	984	WP_420227120.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
ACNANG_RS10535 (ACNANG_10535)	-	2372907..2373857 (+)	951	WP_420227121.1	succinylglutamate desuccinylase	-
ACNANG_RS10540 (ACNANG_10540)	pilA	2374347..2375483 (-)	1137	WP_420227122.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNANG_RS10545 (ACNANG_10545)	-	2375938..2376375 (+)	438	WP_420227123.1	hypothetical protein	-
ACNANG_RS10550 (ACNANG_10550)	-	2376914..2377045 (+)	132	WP_420227124.1	hypothetical protein	-
ACNANG_RS10555 (ACNANG_10555)	rsmD	2377074..2377679 (+)	606	WP_420227125.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACNANG_RS10560 (ACNANG_10560)	coaD	2378064..2378564 (+)	501	WP_420227126.1	pantetheine-phosphate adenylyltransferase	-
ACNANG_RS10565 (ACNANG_10565)	-	2378610..2378876 (+)	267	WP_189614329.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACNANG_RS10570 (ACNANG_10570)	-	2378952..2379824 (-)	873	WP_420227127.1	MOSC domain-containing protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 39424.60 Da
• Isoelectric Point: 9.3586

>NTDB_id=1108442 ACNANG_RS10540 WP_420227122.1 2374347..2375483(-) (pilA) [Pigmentiphaga litoralis strain E30]
MRSFFTRLSPSAEPAREAPPVAAPTPVLPDHAVTPTVPAPAPSVTPAPAVSTPIAIAPAPSAPIPEPAPAAAKAAKASWL
NRLKTGLSRTGQNFTSLFIGVKVDEDLFEELETALIMADTGVDAATSLLKSLRARVKQERIEDAQQVKVVLRDVLAAHLR
PLEKTFALDRPYPVVTMLAGVNGAGKTTSIGKLARTFQNQGKKVLLAAGDTFRAAAREQLVEWGARNNVTVIAQDGGDPA
AVAFDAVQSGKARGMGVVMIDTAGRLPTQLHLMEEIKKIKRVIGKAEPTAPHEVLLVIDGNTGQNALAQIKAFDQAIGLT
GLIVTKLDGTAKGGILAAVAAGAQGVRPIPVYWIGVGEGIEDLQPFVADEFAGAVLGL

Nucleotide

• Length: 1137 bp

>NTDB_id=1108442 ACNANG_RS10540 WP_420227122.1 2374347..2375483(-) (pilA) [Pigmentiphaga litoralis strain E30]
GTGCGGTCGTTCTTCACCCGGCTGTCTCCCAGCGCCGAACCGGCGCGAGAGGCGCCGCCGGTGGCGGCCCCGACGCCTGT
GCTGCCGGACCATGCGGTCACACCCACCGTCCCGGCGCCCGCACCAAGCGTGACACCGGCGCCCGCCGTGTCGACACCGA
TCGCGATCGCGCCCGCACCTTCGGCTCCGATCCCCGAGCCTGCGCCCGCCGCCGCAAAAGCCGCCAAGGCGAGCTGGCTG
AATCGGCTGAAGACGGGGTTGTCGCGCACGGGTCAGAACTTCACGTCGCTGTTCATTGGCGTGAAGGTCGACGAGGACCT
GTTTGAAGAGCTGGAAACCGCATTGATCATGGCGGACACGGGCGTGGACGCGGCGACGTCGCTGCTGAAGAGCCTGCGTG
CCCGCGTGAAGCAGGAACGGATCGAAGATGCGCAGCAGGTGAAGGTGGTGCTGCGCGACGTGCTGGCGGCGCACTTGCGG
CCGCTGGAAAAGACGTTTGCGCTGGACCGGCCGTACCCGGTGGTGACGATGCTGGCCGGTGTGAACGGCGCGGGCAAGAC
GACGTCGATCGGCAAGCTGGCGCGCACCTTCCAGAATCAGGGCAAGAAGGTGCTGCTGGCGGCGGGCGATACGTTCCGGG
CGGCGGCGCGCGAGCAGCTGGTGGAGTGGGGCGCCCGCAACAACGTGACGGTGATCGCGCAGGACGGCGGTGATCCGGCC
GCGGTGGCGTTCGACGCGGTGCAGTCGGGCAAGGCGCGGGGCATGGGTGTCGTGATGATCGACACGGCCGGGCGGTTGCC
GACGCAGTTGCACCTGATGGAAGAGATCAAGAAGATCAAGCGGGTGATTGGCAAGGCCGAGCCGACGGCGCCGCACGAAG
TGCTGCTGGTGATCGACGGCAATACAGGCCAGAACGCCTTGGCGCAGATCAAGGCGTTCGATCAGGCGATCGGCCTGACC
GGCCTGATCGTGACCAAGCTGGACGGCACGGCCAAGGGCGGCATTCTGGCCGCCGTGGCTGCAGGTGCGCAGGGCGTGCG
GCCGATTCCGGTGTACTGGATCGGCGTGGGCGAAGGGATCGAGGATCTGCAGCCGTTCGTGGCGGATGAATTCGCGGGCG
CGGTGCTTGGGCTGTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (94-155)

• SRP54-type protein, GTPase domain (SRP54) (174-376)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.544	83.598	0.489