Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACN19N_RS07475 | Genome accession | NZ_CP184160 |
| Coordinates | 1551809..1552195 (+) | Length | 128 a.a. |
| NCBI ID | WP_004662377.1 | Uniprot ID | A0A9E9L702 |
| Organism | Acinetobacter sp. LF10 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1546809..1557195
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN19N_RS07445 (ACN19N_07445) | kdsB | 1547389..1548150 (+) | 762 | WP_420002308.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACN19N_RS07450 (ACN19N_07450) | - | 1548153..1549136 (+) | 984 | WP_420002309.1 | DNA polymerase III subunit delta' | - |
| ACN19N_RS07455 (ACN19N_07455) | - | 1549476..1549820 (+) | 345 | WP_004662384.1 | PilZ domain-containing protein | - |
| ACN19N_RS07460 (ACN19N_07460) | - | 1549837..1550610 (+) | 774 | WP_004662382.1 | TatD family hydrolase | - |
| ACN19N_RS07465 (ACN19N_07465) | - | 1550651..1551262 (+) | 612 | WP_420002365.1 | TetR/AcrR family transcriptional regulator | - |
| ACN19N_RS07470 (ACN19N_07470) | - | 1551271..1551822 (+) | 552 | WP_005159908.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ACN19N_RS07475 (ACN19N_07475) | xcpV | 1551809..1552195 (+) | 387 | WP_004662377.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACN19N_RS07480 (ACN19N_07480) | xcpW | 1552195..1552824 (+) | 630 | WP_420002310.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACN19N_RS07485 (ACN19N_07485) | gspK | 1552821..1553777 (+) | 957 | WP_269228097.1 | type II secretion system minor pseudopilin GspK | - |
| ACN19N_RS07490 (ACN19N_07490) | - | 1553888..1554484 (+) | 597 | WP_004662372.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACN19N_RS07495 (ACN19N_07495) | ung | 1554530..1555243 (+) | 714 | WP_050040245.1 | uracil-DNA glycosylase | - |
| ACN19N_RS07500 (ACN19N_07500) | - | 1555240..1556364 (+) | 1125 | WP_269230446.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACN19N_RS07505 (ACN19N_07505) | tadA | 1556370..1556894 (+) | 525 | WP_420002311.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 128 a.a. Molecular weight: 14253.70 Da Isoelectric Point: 10.0997
>NTDB_id=1108015 ACN19N_RS07475 WP_004662377.1 1551809..1552195(+) (xcpV) [Acinetobacter sp. LF10]
MKKIKAFTLLEVMVALAIFAVAAIALTKIAMQYTQSTSSAILRTKAQFVAMNEVAMMEMNQEWLDGTQSKQVTSQGETWQ
IDKKAQATISPKIQRIELQVSLFNTEQGKVEAGITNMVFFNYPAKAKT
MKKIKAFTLLEVMVALAIFAVAAIALTKIAMQYTQSTSSAILRTKAQFVAMNEVAMMEMNQEWLDGTQSKQVTSQGETWQ
IDKKAQATISPKIQRIELQVSLFNTEQGKVEAGITNMVFFNYPAKAKT
Nucleotide
Download Length: 387 bp
>NTDB_id=1108015 ACN19N_RS07475 WP_004662377.1 1551809..1552195(+) (xcpV) [Acinetobacter sp. LF10]
ATGAAGAAGATTAAAGCATTTACCCTATTGGAAGTGATGGTTGCATTAGCAATATTTGCTGTTGCTGCAATTGCATTAAC
AAAAATTGCCATGCAATATACACAATCTACATCGAGTGCGATTTTACGAACAAAAGCACAGTTCGTTGCAATGAATGAGG
TTGCAATGATGGAAATGAATCAAGAATGGTTAGATGGAACGCAATCGAAACAGGTGACTTCTCAAGGTGAGACTTGGCAG
ATTGATAAAAAAGCACAGGCTACAATTAGTCCCAAAATACAACGTATCGAATTACAAGTAAGTTTATTTAATACTGAGCA
AGGTAAAGTTGAAGCGGGCATCACCAATATGGTGTTTTTTAATTATCCAGCAAAAGCTAAAACATGA
ATGAAGAAGATTAAAGCATTTACCCTATTGGAAGTGATGGTTGCATTAGCAATATTTGCTGTTGCTGCAATTGCATTAAC
AAAAATTGCCATGCAATATACACAATCTACATCGAGTGCGATTTTACGAACAAAAGCACAGTTCGTTGCAATGAATGAGG
TTGCAATGATGGAAATGAATCAAGAATGGTTAGATGGAACGCAATCGAAACAGGTGACTTCTCAAGGTGAGACTTGGCAG
ATTGATAAAAAAGCACAGGCTACAATTAGTCCCAAAATACAACGTATCGAATTACAAGTAAGTTTATTTAATACTGAGCA
AGGTAAAGTTGAAGCGGGCATCACCAATATGGTGTTTTTTAATTATCCAGCAAAAGCTAAAACATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
82.4 |
97.656 |
0.805 |