Detailed information NTG1108016

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACN19N_RS07480
• Genome accession: NZ_CP184160
• Coordinates: 1552195..1552824 (+)
• Length: 209 a.a.
• NCBI ID: WP_420002310.1
• Uniprot ID: -
• Organism: Acinetobacter sp. LF10
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1547195..1557824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN19N_RS07445 (ACN19N_07445)	kdsB	1547389..1548150 (+)	762	WP_420002308.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACN19N_RS07450 (ACN19N_07450)	-	1548153..1549136 (+)	984	WP_420002309.1	DNA polymerase III subunit delta'	-
ACN19N_RS07455 (ACN19N_07455)	-	1549476..1549820 (+)	345	WP_004662384.1	PilZ domain-containing protein	-
ACN19N_RS07460 (ACN19N_07460)	-	1549837..1550610 (+)	774	WP_004662382.1	TatD family hydrolase	-
ACN19N_RS07465 (ACN19N_07465)	-	1550651..1551262 (+)	612	WP_420002365.1	TetR/AcrR family transcriptional regulator	-
ACN19N_RS07470 (ACN19N_07470)	-	1551271..1551822 (+)	552	WP_005159908.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ACN19N_RS07475 (ACN19N_07475)	xcpV	1551809..1552195 (+)	387	WP_004662377.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACN19N_RS07480 (ACN19N_07480)	xcpW	1552195..1552824 (+)	630	WP_420002310.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACN19N_RS07485 (ACN19N_07485)	gspK	1552821..1553777 (+)	957	WP_269228097.1	type II secretion system minor pseudopilin GspK	-
ACN19N_RS07490 (ACN19N_07490)	-	1553888..1554484 (+)	597	WP_004662372.1	6-pyruvoyl trahydropterin synthase family protein	-
ACN19N_RS07495 (ACN19N_07495)	ung	1554530..1555243 (+)	714	WP_050040245.1	uracil-DNA glycosylase	-
ACN19N_RS07500 (ACN19N_07500)	-	1555240..1556364 (+)	1125	WP_269230446.1	enoyl-CoA hydratase/isomerase family protein	-
ACN19N_RS07505 (ACN19N_07505)	tadA	1556370..1556894 (+)	525	WP_420002311.1	tRNA adenosine(34) deaminase TadA	-
ACN19N_RS07510 (ACN19N_07510)	-	1556961..1557401 (+)	441	WP_269239549.1	SRPBCC family protein	-

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 23848.58 Da
• Isoelectric Point: 9.0640

>NTDB_id=1108016 ACN19N_RS07480 WP_420002310.1 1552195..1552824(+) (xcpW) [Acinetobacter sp. LF10]
MKIKKGFTLVELLVAIAIFAVLSMLGWKVFDYLLKVKDRNAEHETHLFALQDAYQQILRDSLQIIPLTANDGRQLQAALV
LNDRGFMFSKAGVSDPLKQGLSPYERIEYRYDSTQKKVYRLKYSNLNIPNRVQPISSTLLENVDQFKVIVMNPQELTQWP
ENIGDPNNINELKKLPLGLKIQLSVAGTDYEWIYSLLNANQLLGNNSPP

Nucleotide

• Length: 630 bp

>NTDB_id=1108016 ACN19N_RS07480 WP_420002310.1 1552195..1552824(+) (xcpW) [Acinetobacter sp. LF10]
ATGAAAATTAAAAAGGGTTTTACCCTTGTTGAATTGCTGGTTGCAATTGCTATTTTTGCCGTACTTTCAATGCTTGGTTG
GAAAGTTTTTGATTATTTATTAAAAGTCAAAGATCGTAATGCAGAACATGAAACACATTTATTTGCGCTACAAGATGCCT
ATCAGCAGATTCTAAGGGATAGTCTCCAAATTATTCCATTAACGGCAAATGATGGTCGACAATTACAGGCCGCTTTGGTG
CTAAATGATCGTGGTTTTATGTTTAGCAAAGCAGGAGTATCCGATCCGTTGAAACAAGGTTTGTCACCTTATGAGCGCAT
TGAATATCGCTACGATTCAACGCAGAAAAAAGTTTATCGACTCAAATATTCAAATCTAAATATTCCAAATCGGGTACAAC
CCATCTCAAGTACCTTATTAGAAAACGTAGATCAATTTAAAGTAATCGTCATGAATCCACAGGAACTGACACAATGGCCT
GAAAATATTGGTGATCCTAATAATATTAATGAGTTAAAAAAATTACCATTGGGCTTAAAAATACAGCTTAGTGTTGCAGG
TACGGATTACGAGTGGATTTATAGTCTACTGAATGCAAATCAATTGTTGGGAAATAACTCACCACCATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	73.822	91.388	0.675