Detailed information
Bioinformatically predicted
Overview
| Name | treR | Type | Regulator |
| Locus tag | HZ99_RS23180 | Genome accession | NZ_CP008896 |
| Coordinates | 5171086..5171790 (-) | Length | 234 a.a. |
| NCBI ID | WP_038446333.1 | Uniprot ID | - |
| Organism | Pseudomonas fluorescens strain UK4 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5166086..5176790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZ99_RS23160 (HZ99_23670) | - | 5166928..5167290 (-) | 363 | WP_038446329.1 | DoxX family protein | - |
| HZ99_RS23165 (HZ99_23680) | - | 5167583..5168449 (-) | 867 | WP_038446330.1 | AraC family transcriptional regulator | - |
| HZ99_RS23170 (HZ99_23685) | - | 5168565..5169122 (+) | 558 | WP_038446331.1 | carboxymuconolactone decarboxylase family protein | - |
| HZ99_RS23175 (HZ99_23690) | - | 5169558..5170829 (+) | 1272 | WP_038446332.1 | OprD family porin | - |
| HZ99_RS23180 (HZ99_23700) | treR | 5171086..5171790 (-) | 705 | WP_038446333.1 | trehalose operon repressor | Regulator |
| HZ99_RS23185 (HZ99_23705) | treP | 5171998..5173440 (+) | 1443 | WP_038446334.1 | PTS system trehalose-specific EIIBC component | - |
| HZ99_RS23190 (HZ99_23710) | treC | 5173525..5175171 (+) | 1647 | WP_038446335.1 | alpha,alpha-phosphotrehalase | - |
| HZ99_RS23195 (HZ99_23715) | - | 5175246..5176466 (+) | 1221 | WP_038446336.1 | maltoporin | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 26638.09 Da Isoelectric Point: 6.3017
>NTDB_id=110800 HZ99_RS23180 WP_038446333.1 5171086..5171790(-) (treR) [Pseudomonas fluorescens strain UK4]
MSKYNQIYTDLLASITTERLQRGTRLPSETELMETYQASRGTVRRAIEQLQERGFAQKIHGKGTFVLSPNPIEFQLGGIV
SFHETHADLGDDVRTEVVEFTQLPLEGSLLQHIEAEPGTLITRIKRVRRIGGKRVILDINHFVADLIPGLDQTIAAQSIY
AFIEQTLQLQISYAQRTIEALPRGKDDQAHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDIARR
MSKYNQIYTDLLASITTERLQRGTRLPSETELMETYQASRGTVRRAIEQLQERGFAQKIHGKGTFVLSPNPIEFQLGGIV
SFHETHADLGDDVRTEVVEFTQLPLEGSLLQHIEAEPGTLITRIKRVRRIGGKRVILDINHFVADLIPGLDQTIAAQSIY
AFIEQTLQLQISYAQRTIEALPRGKDDQAHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDIARR
Nucleotide
Download Length: 705 bp
>NTDB_id=110800 HZ99_RS23180 WP_038446333.1 5171086..5171790(-) (treR) [Pseudomonas fluorescens strain UK4]
ATGAGTAAATACAACCAGATCTACACCGATCTGCTTGCCAGCATCACCACTGAACGCCTGCAACGCGGCACGCGCCTGCC
TTCCGAAACCGAATTGATGGAAACCTACCAGGCGAGCCGTGGCACCGTGCGTCGGGCCATCGAGCAGTTGCAGGAACGCG
GGTTTGCACAAAAAATCCATGGCAAGGGCACCTTCGTGCTGTCACCCAACCCGATTGAGTTTCAACTGGGCGGCATCGTC
AGCTTCCACGAGACCCACGCCGACCTGGGCGATGACGTACGTACCGAAGTGGTCGAGTTCACTCAATTACCTCTGGAAGG
CTCGCTGCTGCAGCATATCGAGGCCGAACCCGGCACGCTGATCACCCGCATCAAGCGCGTGCGGCGCATTGGCGGCAAAC
GGGTGATCCTCGACATCAACCACTTCGTCGCCGACCTGATCCCCGGGCTGGACCAGACGATTGCCGCACAGTCGATCTAC
GCCTTTATCGAGCAGACGCTGCAGCTGCAAATCAGCTACGCCCAGCGCACCATCGAGGCGCTGCCACGTGGCAAGGACGA
TCAGGCGCACCTGGACCTCGACGGTCAGAGCCATGTGATTGTGGTGAGCAACCAGACGTTTTTGCAGGATGGGCGGCAGT
TCGAGTACACCGAATCGCGGCATACGTTGGACAAGTTTTACTTTTCGGATATTGCACGGCGGTAA
ATGAGTAAATACAACCAGATCTACACCGATCTGCTTGCCAGCATCACCACTGAACGCCTGCAACGCGGCACGCGCCTGCC
TTCCGAAACCGAATTGATGGAAACCTACCAGGCGAGCCGTGGCACCGTGCGTCGGGCCATCGAGCAGTTGCAGGAACGCG
GGTTTGCACAAAAAATCCATGGCAAGGGCACCTTCGTGCTGTCACCCAACCCGATTGAGTTTCAACTGGGCGGCATCGTC
AGCTTCCACGAGACCCACGCCGACCTGGGCGATGACGTACGTACCGAAGTGGTCGAGTTCACTCAATTACCTCTGGAAGG
CTCGCTGCTGCAGCATATCGAGGCCGAACCCGGCACGCTGATCACCCGCATCAAGCGCGTGCGGCGCATTGGCGGCAAAC
GGGTGATCCTCGACATCAACCACTTCGTCGCCGACCTGATCCCCGGGCTGGACCAGACGATTGCCGCACAGTCGATCTAC
GCCTTTATCGAGCAGACGCTGCAGCTGCAAATCAGCTACGCCCAGCGCACCATCGAGGCGCTGCCACGTGGCAAGGACGA
TCAGGCGCACCTGGACCTCGACGGTCAGAGCCATGTGATTGTGGTGAGCAACCAGACGTTTTTGCAGGATGGGCGGCAGT
TCGAGTACACCGAATCGCGGCATACGTTGGACAAGTTTTACTTTTCGGATATTGCACGGCGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| treR | Streptococcus mutans UA159 |
37.179 |
100 |
0.372 |