Detailed information NTG0110785

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACGJAX_RS13610
• Genome accession: NZ_AP035776
• Coordinates: 2918626..2920854 (+)
• Length: 742 a.a.
• NCBI ID: WP_390959411.1
• Uniprot ID: -
• Organism: Pseudomonas moorei strain m318
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2913626..2925854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGJAX_RS13585 (PMm318_A26710)	-	2914741..2915400 (+)	660	WP_390959403.1	transglutaminase domain-containing protein	-
ACGJAX_RS13590 (PMm318_A26720)	-	2915444..2916067 (+)	624	WP_390959405.1	glutathione S-transferase N-terminal domain-containing protein	-
ACGJAX_RS13595 (PMm318_A26730)	-	2916201..2917133 (+)	933	WP_247255336.1	ABC transporter ATP-binding protein	-
ACGJAX_RS13600 (PMm318_A26740)	-	2917130..2917909 (+)	780	WP_390959407.1	ABC transporter permease	-
ACGJAX_RS13605 (PMm318_A26750)	-	2917974..2918489 (-)	516	WP_390959409.1	DUF2062 domain-containing protein	-
ACGJAX_RS13610 (PMm318_A26760)	comA	2918626..2920854 (+)	2229	WP_390959411.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACGJAX_RS13615 (PMm318_A26770)	exbB	2920953..2921588 (+)	636	WP_247255339.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACGJAX_RS13620 (PMm318_A26780)	-	2921585..2922010 (+)	426	WP_090317677.1	biopolymer transporter ExbD	-
ACGJAX_RS13625 (PMm318_A26790)	lpxK	2922010..2923020 (+)	1011	WP_248915779.1	tetraacyldisaccharide 4'-kinase	-
ACGJAX_RS13630 (PMm318_A26800)	-	2923044..2923229 (+)	186	WP_003179363.1	Trm112 family protein	-
ACGJAX_RS13635 (PMm318_A26810)	kdsB	2923226..2923990 (+)	765	WP_247255341.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACGJAX_RS13640 (PMm318_A26820)	-	2923990..2924454 (+)	465	WP_247255342.1	low molecular weight protein-tyrosine-phosphatase	-
ACGJAX_RS13645 (PMm318_A26830)	murB	2924451..2925470 (+)	1020	WP_390959415.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 742 a.a.
• Molecular weight: 81383.39 Da
• Isoelectric Point: 9.4347

>NTDB_id=110785 ACGJAX_RS13610 WP_390959411.1 2918626..2920854(+) (comA) [Pseudomonas moorei strain m318]
MRTGMMALALGLLTLRFLPALPPVGLWLLMPVVGLMVLPFRTYPVAFFLFGLSWACAQAQWALDDRLPASLDGETRWVEG
RVVGLPQNNEGVIRFELADARSRHGKVPQLMRLAWYEGPPVNSGERWRLAVKLKRPAGLLNPYAFDYDAWLFAQRIGATG
TVKDGERLREAQWAWRDGIRQRLQAVDAQGRTGVLAALVLGDGGGLSRQDWQVLQDTGTVHLLVISGQHIGLLAGVVYLL
IAGLARYGLWSNRLPWLPWACGLAFAAALGYGLLAGFDVPVRRACLMIGLVLLWRLRFRHLGAWWPLLLALNGVLLLDPL
ASLQPGFWLSFAAVAVLIFTFGGRLGPWLWWQTWTRAQWLIAIGLGPLLLVLGLPISVSGPLVNLLAVPWISLVVLPPAL
LGTLLLPVPYVGEGLLWITGGLIDGLFWGLGWVAGQVPAWVPTAIPPWVWAIGTLGAFLLLLPRGVPIRPLGWPMLLLLV
FPPRTEIPEGIAEVWQLDVGQGLAILVRTRHHTLLYDAGPRFGDNDLGERVVLPTIRKLGVDGIDLMLISHAHADHAGGA
QAIAQGLPVRHVLGGEPAELPVNAGGCESGRRWTWDGVNFELWQWAHARESNPKSCILQIEASGERMLLTGDIDMAAERA
LLDSPLAVATDWLQSPHHGSRSSSSMALLNALQPKAVLISRGQGNSFGHPHPTVLARYEKLGMAIYDSAEQGAIHLQLGR
YEAPRSMRLERRFWRDPPPVSK

Nucleotide

• Length: 2229 bp

>NTDB_id=110785 ACGJAX_RS13610 WP_390959411.1 2918626..2920854(+) (comA) [Pseudomonas moorei strain m318]
ATGCGCACAGGGATGATGGCGCTGGCGTTGGGTCTGCTGACCTTGCGCTTTTTACCGGCATTGCCGCCGGTCGGGTTGTG
GCTGTTGATGCCGGTTGTGGGTTTGATGGTGTTGCCATTTAGGACCTACCCGGTGGCGTTTTTCCTGTTCGGCTTGAGTT
GGGCCTGCGCACAGGCGCAATGGGCACTGGATGATCGTTTGCCAGCGAGCCTCGATGGTGAAACGCGCTGGGTCGAAGGA
CGGGTGGTGGGGCTGCCCCAGAACAACGAAGGCGTAATCCGTTTTGAGCTGGCGGATGCCCGGTCGCGACACGGCAAAGT
GCCACAACTCATGCGACTGGCCTGGTATGAAGGGCCGCCGGTGAACAGCGGCGAGCGCTGGCGCTTGGCGGTCAAGTTGA
AGCGTCCCGCCGGGCTGCTCAATCCCTATGCCTTCGATTACGACGCCTGGCTGTTCGCGCAACGCATCGGGGCAACGGGT
ACCGTCAAGGACGGCGAGCGTTTGCGCGAGGCGCAATGGGCCTGGCGCGATGGTATTCGTCAGCGCTTGCAGGCCGTGGA
TGCCCAAGGGCGGACGGGTGTGCTGGCCGCTTTGGTTCTGGGTGATGGTGGTGGACTCAGCCGCCAGGATTGGCAGGTGT
TGCAAGACACCGGCACCGTGCATTTATTGGTGATTTCCGGGCAGCACATTGGTCTGCTGGCAGGGGTGGTGTATCTGCTG
ATTGCCGGGCTCGCCCGCTATGGCCTGTGGTCGAACCGTCTGCCATGGTTGCCCTGGGCCTGTGGTCTGGCCTTCGCTGC
AGCGCTTGGTTACGGGCTATTGGCCGGTTTTGATGTGCCGGTGCGGCGTGCCTGTTTGATGATCGGTCTGGTGCTGTTAT
GGCGCCTGCGTTTTCGACACCTTGGCGCGTGGTGGCCGTTGCTGCTGGCGCTCAATGGCGTTTTGCTATTGGATCCGCTG
GCCAGTCTGCAACCGGGGTTCTGGTTGTCTTTCGCAGCGGTGGCCGTGCTGATCTTCACCTTCGGCGGTCGCTTGGGGCC
TTGGCTTTGGTGGCAAACCTGGACGCGCGCGCAATGGCTGATCGCAATCGGCCTGGGCCCGTTGTTGCTGGTACTGGGTT
TGCCGATCAGTGTCAGCGGGCCGCTGGTCAACCTGTTGGCCGTGCCGTGGATCAGTCTGGTGGTACTGCCACCGGCATTG
CTCGGGACGCTGTTGTTGCCCGTGCCTTATGTGGGCGAGGGCCTGTTGTGGATCACGGGTGGTCTGATCGATGGGTTGTT
CTGGGGGCTGGGGTGGGTGGCGGGCCAGGTTCCGGCGTGGGTGCCCACCGCGATTCCACCATGGGTCTGGGCCATCGGTA
CCTTGGGAGCCTTTCTCCTTTTGCTGCCGCGGGGCGTACCGATACGCCCGCTCGGATGGCCAATGCTGCTGTTGCTGGTT
TTTCCGCCGCGCACCGAAATACCGGAAGGAATTGCCGAGGTCTGGCAGCTGGATGTCGGCCAGGGCCTGGCGATCCTGGT
CCGCACTCGCCATCACACGCTGCTGTATGACGCGGGTCCTCGGTTCGGTGACAACGATCTCGGCGAGCGCGTGGTTTTGC
CAACGATACGCAAATTGGGCGTGGATGGCATCGATCTGATGTTGATCAGCCACGCCCACGCCGATCATGCCGGCGGAGCG
CAGGCGATCGCCCAGGGACTGCCGGTGAGGCATGTACTCGGTGGTGAGCCGGCAGAGTTGCCGGTGAATGCGGGGGGCTG
CGAGAGCGGTCGGCGATGGACCTGGGACGGCGTGAACTTTGAACTATGGCAATGGGCGCATGCCCGCGAAAGCAATCCGA
AATCCTGCATTCTGCAGATTGAAGCCAGCGGCGAGCGAATGCTGCTGACCGGCGACATCGACATGGCCGCCGAGCGCGCC
TTGCTCGACAGTCCATTGGCCGTAGCCACCGATTGGCTGCAATCGCCGCACCACGGCAGTCGCAGTTCGTCGTCCATGGC
GCTGCTCAACGCCTTGCAGCCCAAGGCGGTGTTGATCTCCCGTGGCCAGGGCAATTCGTTCGGCCATCCGCACCCGACCG
TCCTGGCACGCTATGAAAAGCTCGGCATGGCGATCTACGACAGTGCGGAGCAGGGTGCCATTCATCTGCAACTCGGGCGT
TACGAGGCGCCGCGCTCCATGCGTCTGGAACGGCGCTTCTGGCGCGACCCACCGCCAGTGAGCAAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (26-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.057	96.9	0.592