Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ACN9KP_RS15095 Genome accession   NZ_CP183947
Coordinates   3070665..3071597 (-) Length   310 a.a.
NCBI ID   WP_025650217.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ya-1 isolate Tropical rainforest soil     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3065665..3076597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN9KP_RS15065 (ACN9KP_15065) - 3065935..3066411 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  ACN9KP_RS15070 (ACN9KP_15070) - 3066411..3066695 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  ACN9KP_RS15075 (ACN9KP_15075) mnhG 3066679..3067053 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ACN9KP_RS15080 (ACN9KP_15080) - 3067093..3067476 (-) 384 WP_044052949.1 hotdog fold thioesterase -
  ACN9KP_RS15085 (ACN9KP_15085) - 3067498..3068128 (-) 631 Protein_2904 response regulator transcription factor -
  ACN9KP_RS15090 (ACN9KP_15090) comP 3068209..3070512 (-) 2304 WP_003152050.1 sensor histidine kinase Regulator
  ACN9KP_RS15095 (ACN9KP_15095) comQ 3070665..3071597 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ACN9KP_RS15100 (ACN9KP_15100) degQ 3071782..3071922 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACN9KP_RS15105 (ACN9KP_15105) - 3072388..3072729 (+) 342 WP_014305721.1 hypothetical protein -
  ACN9KP_RS15110 (ACN9KP_15110) - 3072736..3073956 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  ACN9KP_RS15115 (ACN9KP_15115) - 3074086..3075552 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  ACN9KP_RS15120 (ACN9KP_15120) - 3075570..3076121 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35663.80 Da        Isoelectric Point: 5.4532

>NTDB_id=1107335 ACN9KP_RS15095 WP_025650217.1 3070665..3071597(-) (comQ) [Bacillus velezensis strain Ya-1 isolate Tropical rainforest soil]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=1107335 ACN9KP_RS15095 WP_025650217.1 3070665..3071597(-) (comQ) [Bacillus velezensis strain Ya-1 isolate Tropical rainforest soil]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571


Multiple sequence alignment