Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   ACLKMZ_RS11865 Genome accession   NZ_CP183909
Coordinates   2437740..2442215 (-) Length   1491 a.a.
NCBI ID   WP_419879931.1    Uniprot ID   -
Organism   Acinetobacter gandensis strain M1_NDM_tet(X3)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2432740..2447215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKMZ_RS11835 elsL 2433806..2434300 (-) 495 WP_180081060.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ACLKMZ_RS11840 - 2434293..2434718 (-) 426 WP_067764538.1 YbaN family protein -
  ACLKMZ_RS11845 - 2434807..2435667 (+) 861 WP_180081057.1 DUF1853 family protein -
  ACLKMZ_RS11850 - 2435819..2435968 (+) 150 WP_067764544.1 entericidin A/B family lipoprotein -
  ACLKMZ_RS11855 dapE 2436084..2437217 (+) 1134 WP_180081055.1 succinyl-diaminopimelate desuccinylase -
  ACLKMZ_RS11860 - 2437275..2437736 (-) 462 WP_067764550.1 hypothetical protein -
  ACLKMZ_RS11865 chpA 2437740..2442215 (-) 4476 WP_419879931.1 Hpt domain-containing protein Regulator
  ACLKMZ_RS11870 - 2442452..2444527 (-) 2076 WP_067764556.1 methyl-accepting chemotaxis protein -
  ACLKMZ_RS11875 - 2444572..2445108 (-) 537 WP_067764559.1 chemotaxis protein CheW -
  ACLKMZ_RS11880 - 2445115..2445483 (-) 369 WP_067764563.1 response regulator -
  ACLKMZ_RS11885 pilG 2445508..2445891 (-) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  ACLKMZ_RS11890 - 2446241..2446828 (+) 588 WP_373685038.1 hypothetical protein -

Sequence

Protein


Download         Length: 1491 a.a.        Molecular weight: 166520.02 Da        Isoelectric Point: 4.2952

>NTDB_id=1107173 ACLKMZ_RS11865 WP_419879931.1 2437740..2442215(-) (chpA) [Acinetobacter gandensis strain M1_NDM_tet(X3)]
MLEIFVEEIEEIFAELDGLFTTWLDNPQDKETLTTIRRHFHTLKGSGRMVGAKSAGESAWAVEDTLNRVIAGSVQLTPTV
QKFAKTVLNVYQYKLYPRFKNVAELDVDLRPLVLLGQQLQQNMSLEPALEELLGLADSLNSEDGVTGLELVDQAVEVAPA
PETIVVVNELEQTDNADDFDDALVAETLTIFIEEAEEHLSTIDQFLQTEDSKSQDYNGLIRALHTLRGSSSMAQIDEIFE
ASSKVENLFKTLLQEEIVSSSKEAALLIQYAEFVRDYLHVLRAGNTDNLQSIYATFNKAWEDYGFASQEHLESEDNPQGL
VSKLIELNIDQLLDAEFEFDKRALAEFPSYIETLSQQAQQLADHTNTRASVGIHDFTTELNAAYQALIQKPELLHADYAY
ELFAQAHQEFIQLFDTLAAGQRVVLSEDIQKFLAELTAYVQQDIEQFAKLKSADVVEVAEAEEPVTQTEIHGVDDVQTST
STAIKGVDFALLSQRVQQDHQQKQSDAANRDFDEDLLNIFIEEAEELLVGIDQDLSTWTRDQSNTAALNNLMRYLHTLKG
GANMISASHVGLIAHELESIYERIIRQQISVSPSLIQIIRLVQDDIADRIQTIREETIDYPADQVIDILQNIQSISTGEV
SHVDVKAPAEQLDQPAAVVDDISVVEQFADNNTVDTEQVVDEPLSASEIEIAQDSAVEILEHAVAEHGQDVDDDLRAVME
ETFLEESEEILEQATQLLNHWIEQRSDRNLLLQLQRAAHSIKGGARMVENEPVASIAYQVETTFEQFAVHHFNSNAYDGL
LKTTLSWLKQAIFNKDYSNFDSIKLSLESIQYVDVTAQLPNRVAEIDQGIVTKGFEFIQGDGVEPPSMLGEWAEASNTDN
SNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMDGELESQIIAKHGSENSRYADFD
PLEMDQYSSINQLSKSLAESASDLVDFKSTLSEKIRDAEGLLLQQSRIQSEIQESLMRTRLVPFDRLLPRLQRIVRQTSS
TLNRPAELVVQNTEGELDRTILERLVTPFEHMLRNAIDHGLEDTAERLALNKPEVGNIVLNISRQGTDVLVSFSDDGKGI
DEAKIKEKALKQGLIKADQFLDKQEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVSVDSEMGKGTTFTIR
VPTTVAVSDALMVKAGDQQYAISLAQIERIVRIAPSALEGYFNGKEDFFKIDNTNYKLRYLSEFVGNQPVPRLSNVAHSL
PVLLIKGNSGQTIALLVDQLVGSRSQIVVKPIGQQFTSVGAIAGATILGDGQVCLILDGQNIARQIQTTQRIKQSIDQRD
LSRQGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIH
RDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEALIAEKQG

Nucleotide


Download         Length: 4476 bp        

>NTDB_id=1107173 ACLKMZ_RS11865 WP_419879931.1 2437740..2442215(-) (chpA) [Acinetobacter gandensis strain M1_NDM_tet(X3)]
ATTCTTGAGATTTTTGTTGAAGAAATAGAAGAGATCTTCGCTGAATTAGATGGTCTATTTACAACTTGGCTAGACAATCC
ACAAGATAAAGAAACCCTCACGACTATTCGTCGCCATTTCCATACGCTGAAAGGTTCAGGTCGTATGGTCGGGGCGAAAT
CGGCAGGTGAATCGGCTTGGGCGGTTGAAGATACACTCAATCGTGTGATTGCGGGTTCAGTTCAGTTAACACCTACAGTT
CAAAAATTTGCTAAAACTGTTTTAAACGTTTATCAATACAAACTTTATCCACGCTTCAAAAATGTCGCAGAATTGGATGT
AGACTTGCGTCCATTGGTTTTACTAGGTCAGCAATTACAACAAAATATGAGCCTAGAGCCAGCATTGGAAGAGCTGCTTG
GTTTAGCAGATAGCTTAAACAGTGAAGATGGTGTTACAGGTTTAGAGCTTGTTGATCAAGCTGTTGAAGTAGCGCCTGCG
CCTGAAACAATTGTAGTAGTGAATGAACTGGAACAAACAGATAATGCTGATGACTTTGATGATGCTCTGGTTGCTGAAAC
CCTGACGATCTTTATTGAAGAAGCAGAAGAGCATCTATCAACAATTGATCAGTTCTTACAAACCGAAGATTCAAAATCAC
AGGACTATAATGGCTTAATCCGCGCGTTACATACATTGCGTGGAAGTTCATCGATGGCACAAATTGATGAAATTTTTGAA
GCAAGCTCAAAAGTAGAGAACTTATTTAAAACATTACTACAAGAAGAGATTGTTTCATCATCGAAAGAAGCTGCATTGTT
AATTCAATATGCTGAATTTGTTCGTGATTATTTACATGTATTACGTGCTGGAAATACTGATAACTTACAATCGATATATG
CAACATTCAACAAAGCTTGGGAAGACTATGGTTTTGCAAGTCAAGAACATCTAGAGTCAGAAGACAATCCTCAAGGCTTG
GTTTCTAAGTTGATTGAATTAAATATTGATCAATTATTAGATGCCGAATTTGAGTTTGATAAACGCGCACTCGCAGAATT
CCCAAGTTATATTGAAACGTTGAGTCAGCAAGCACAGCAATTGGCTGATCATACCAATACACGTGCGTCAGTCGGTATTC
ATGACTTTACGACAGAATTAAATGCTGCATATCAAGCACTGATTCAAAAGCCTGAATTACTGCACGCTGATTATGCATAT
GAGTTATTTGCTCAAGCACATCAAGAGTTCATTCAGTTATTTGACACATTGGCAGCAGGTCAACGTGTAGTTTTAAGTGA
AGATATACAGAAATTCTTAGCTGAATTAACTGCATATGTTCAGCAAGATATTGAACAGTTTGCTAAGCTTAAGTCTGCCG
ATGTTGTTGAGGTAGCTGAAGCTGAAGAACCAGTGACTCAGACTGAAATACATGGTGTTGACGATGTTCAAACCTCAACT
TCAACGGCTATCAAAGGCGTTGATTTTGCATTATTAAGTCAGCGCGTTCAGCAAGATCATCAACAAAAGCAATCAGATGC
TGCTAACCGTGATTTTGATGAAGATTTATTAAATATCTTTATTGAAGAAGCGGAAGAATTATTGGTTGGTATTGACCAAG
ACCTGAGTACATGGACACGTGATCAAAGCAATACAGCGGCGCTGAATAACCTCATGCGTTATTTGCATACACTGAAAGGT
GGTGCAAACATGATTTCAGCATCACATGTGGGGTTAATTGCGCATGAGCTAGAGTCGATTTATGAACGGATTATTCGCCA
GCAAATCAGTGTGAGCCCGAGCTTAATTCAGATTATTCGTTTGGTTCAAGATGATATTGCTGACCGTATTCAAACGATTC
GTGAAGAAACCATTGATTATCCAGCAGATCAGGTCATTGATATTTTACAGAATATCCAATCGATTTCTACGGGTGAGGTA
TCACATGTTGACGTGAAAGCGCCAGCTGAACAGCTTGATCAACCTGCCGCGGTGGTTGATGATATTTCTGTTGTAGAGCA
ATTTGCTGATAACAATACTGTAGACACAGAACAAGTTGTTGATGAGCCTCTGTCTGCATCAGAGATTGAGATTGCTCAAG
ATTCAGCTGTTGAGATCTTAGAACATGCTGTTGCTGAACATGGACAAGATGTTGACGATGACCTTCGTGCCGTTATGGAA
GAAACCTTCCTTGAAGAATCGGAAGAAATTTTAGAACAAGCGACCCAATTGCTGAATCATTGGATTGAGCAACGTAGTGA
CCGTAACTTATTACTTCAATTGCAACGTGCAGCCCACAGTATTAAAGGTGGCGCACGTATGGTTGAAAATGAACCTGTTG
CGTCGATTGCCTACCAAGTTGAAACCACATTTGAACAATTTGCGGTACATCATTTCAACTCGAATGCCTACGATGGTTTA
TTAAAAACCACCTTAAGCTGGTTAAAACAAGCTATTTTCAATAAAGATTATAGTAACTTTGACAGCATTAAATTAAGTCT
TGAATCCATTCAATATGTCGACGTTACGGCTCAGTTGCCAAATCGTGTTGCTGAAATTGATCAAGGTATTGTGACTAAAG
GCTTTGAATTTATTCAAGGTGATGGTGTCGAACCACCTTCAATGCTAGGTGAATGGGCCGAAGCAAGTAATACTGATAAC
AGCAATGAAATGATTCGTATCTCAGCTGACTTGGTTGAGAAGATGATTGACTTGTCTGGTGAGAACTCGATTAACCGCTC
GCGTATTGAGATGGATTTGGGGCAATTGGGGAATACCCTCAATGAAATGGAATTGGCGATTAAGCGTCTTGCTGATCAGT
TACGTCGAATGGATGGTGAGCTTGAGTCGCAAATTATTGCCAAGCACGGTTCTGAAAATTCACGTTATGCCGATTTCGAC
CCATTGGAAATGGATCAGTATTCATCGATTAACCAATTATCAAAGTCACTTGCAGAATCTGCGTCGGACTTAGTCGATTT
TAAGAGTACATTGTCTGAAAAAATCCGTGATGCTGAAGGTTTGTTATTACAACAATCACGTATTCAATCAGAAATTCAAG
AAAGCTTAATGCGTACTCGACTGGTGCCTTTTGATCGTTTGCTACCGCGTTTACAGCGTATTGTGCGACAAACATCTTCG
ACTTTGAACCGTCCAGCTGAATTGGTGGTACAAAATACAGAAGGTGAATTGGACCGTACCATTCTAGAGCGTTTAGTGAC
TCCGTTTGAGCATATGCTACGTAACGCGATTGACCACGGTTTAGAAGATACAGCTGAGCGATTGGCATTGAATAAGCCAG
AAGTGGGTAATATTGTCTTGAATATTAGCCGTCAAGGTACAGACGTATTGGTATCGTTCAGTGATGATGGTAAAGGGATT
GATGAAGCGAAGATTAAAGAAAAAGCTTTAAAACAAGGTTTAATCAAAGCAGACCAATTCTTAGATAAACAAGAAATTCT
ACAATTAATCTTCCATCCAGGTTTCTCAACTGCGCAAGCAGTGACCCAAATTTCAGGTCGTGGTGTTGGTCTAGACGTTG
TACAAAGTGAAATTAAAGCGTTGGGTGGCCATGTATCTGTAGACTCAGAAATGGGCAAAGGCACGACATTTACCATTCGT
GTACCAACAACTGTAGCGGTCAGCGATGCCTTGATGGTGAAAGCCGGTGATCAGCAATATGCGATTTCACTTGCACAAAT
TGAACGTATTGTTCGTATTGCACCGTCAGCGCTAGAAGGCTATTTCAATGGTAAAGAAGACTTCTTCAAAATTGACAATA
CTAATTACAAACTGCGTTATTTATCTGAGTTTGTAGGTAACCAGCCAGTACCACGTTTAAGCAATGTGGCACATTCACTG
CCAGTCCTGTTAATCAAAGGTAACAGCGGGCAAACCATTGCGCTCTTGGTAGATCAGCTTGTGGGTTCACGCTCGCAAAT
TGTGGTTAAACCAATTGGTCAGCAGTTTACCAGTGTCGGTGCCATTGCTGGTGCAACGATTTTGGGTGATGGCCAGGTGT
GTTTGATTCTTGATGGTCAAAATATTGCACGTCAGATTCAAACTACTCAACGCATTAAGCAATCAATCGATCAACGTGAT
CTTAGCCGTCAAGGTAATGCACGTCGCCTCGTTATGATTGTCGATGACTCGGTAACGGTACGTAAGGTAACGTCTCGTCT
ACTTGAGCGCCAAGGTTATGACATTGTAACGGCTAAAGATGGTGTGGATGCAATTGAGCAGCTTGAAAATGTCCGTCCTG
ATTTGATGTTGCTAGATATTGAAATGCCTCGTATGGATGGTTTTGAAGTAACCAACTTGGTACGTCACCATGATATACAT
CGCGATTTGCCAATCATTATGATTACTTCGCGTACCGGTGAAAAACATCGTGAACGCGCATTTAGCTTAGGTGTGACTCA
CTATATGGGTAAACCATTCCAAGAGGCTGAATTACTTGCCAACATTGAAGCATTAATCGCAGAAAAGCAGGGGTAA

Domains

Predicted by InterproScan.

Hpt domain (Hpt)

(515-603)

Hpt domain (Hpt)

(721-785)

Hpt domain (Hpt)

(186-265)

Hpt domain (Hpt)

(1-81)

CheW-like domain (CheW)

(1210-1345)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1068-1203)

Response regulator receiver domain (Response_reg)

(1371-1482)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.676

99.262

0.602

Multiple sequence alignment