Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACLKM2_RS07950 | Genome accession | NZ_CP183899 |
| Coordinates | 1720930..1721376 (-) | Length | 148 a.a. |
| NCBI ID | WP_005170409.1 | Uniprot ID | N9KUI9 |
| Organism | Acinetobacter pseudolwoffii strain M8_NDM_tet(X3) | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1715930..1726376
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKM2_RS07920 | tadA | 1716166..1716681 (-) | 516 | WP_180040959.1 | tRNA adenosine(34) deaminase TadA | - |
| ACLKM2_RS07925 | - | 1716689..1717810 (-) | 1122 | WP_005097318.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACLKM2_RS07930 | ung | 1717807..1718520 (-) | 714 | WP_074383250.1 | uracil-DNA glycosylase | - |
| ACLKM2_RS07935 | - | 1718567..1719163 (-) | 597 | WP_005097321.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACLKM2_RS07940 | gspK | 1719317..1720285 (-) | 969 | WP_411686510.1 | type II secretion system minor pseudopilin GspK | - |
| ACLKM2_RS07945 | xcpW | 1720298..1720933 (-) | 636 | WP_411686511.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACLKM2_RS07950 | xcpV | 1720930..1721376 (-) | 447 | WP_005170409.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACLKM2_RS07955 | - | 1721438..1721989 (-) | 552 | WP_411686512.1 | type II secretion system protein | - |
| ACLKM2_RS07960 | - | 1722004..1722618 (-) | 615 | WP_100355372.1 | TetR/AcrR family transcriptional regulator | - |
| ACLKM2_RS07965 | - | 1722659..1723432 (-) | 774 | WP_100535277.1 | TatD family hydrolase | - |
| ACLKM2_RS07970 | - | 1723460..1723801 (-) | 342 | WP_005170399.1 | PilZ domain-containing protein | - |
| ACLKM2_RS07975 | - | 1723817..1724797 (-) | 981 | WP_179999363.1 | DNA polymerase III subunit delta' C-terminal domain-containing protein | - |
| ACLKM2_RS07980 | kdsB | 1724812..1725573 (-) | 762 | WP_180076189.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 16438.65 Da Isoelectric Point: 7.3853
>NTDB_id=1107049 ACLKM2_RS07950 WP_005170409.1 1720930..1721376(-) (xcpV) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
MHCGHFEQSSSSCAAVKQHFTHRSSGFTLLEVMVALAIFATAAMTLTKVAMQYTQSTSNAILRTKAQFVALNEVAQMEIN
QQWMDGTASKQLTQQGETWQIDKRSEPTISPNVQRIELQVSLVNQETGQVASGISSLMFFNHRMNNTP
MHCGHFEQSSSSCAAVKQHFTHRSSGFTLLEVMVALAIFATAAMTLTKVAMQYTQSTSNAILRTKAQFVALNEVAQMEIN
QQWMDGTASKQLTQQGETWQIDKRSEPTISPNVQRIELQVSLVNQETGQVASGISSLMFFNHRMNNTP
Nucleotide
Download Length: 447 bp
>NTDB_id=1107049 ACLKM2_RS07950 WP_005170409.1 1720930..1721376(-) (xcpV) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
TTGCATTGTGGGCACTTCGAGCAGAGCTCTTCGTCTTGCGCAGCGGTGAAACAGCATTTCACTCATCGCAGCTCAGGCTT
TACCTTGCTGGAAGTTATGGTTGCACTGGCAATTTTCGCCACCGCAGCCATGACGCTGACCAAAGTCGCGATGCAATATA
CCCAGTCAACCTCGAATGCCATTCTGCGCACCAAAGCACAGTTTGTTGCCCTGAACGAAGTGGCTCAAATGGAAATCAAT
CAGCAATGGATGGATGGTACGGCCTCCAAACAGCTGACCCAGCAAGGCGAAACCTGGCAAATTGACAAGCGCAGTGAACC
GACGATCAGTCCCAATGTGCAGCGTATTGAACTACAGGTCAGTCTGGTCAATCAGGAGACTGGTCAAGTTGCATCCGGGA
TCAGCAGCTTGATGTTCTTTAATCATCGCATGAACAATACGCCATGA
TTGCATTGTGGGCACTTCGAGCAGAGCTCTTCGTCTTGCGCAGCGGTGAAACAGCATTTCACTCATCGCAGCTCAGGCTT
TACCTTGCTGGAAGTTATGGTTGCACTGGCAATTTTCGCCACCGCAGCCATGACGCTGACCAAAGTCGCGATGCAATATA
CCCAGTCAACCTCGAATGCCATTCTGCGCACCAAAGCACAGTTTGTTGCCCTGAACGAAGTGGCTCAAATGGAAATCAAT
CAGCAATGGATGGATGGTACGGCCTCCAAACAGCTGACCCAGCAAGGCGAAACCTGGCAAATTGACAAGCGCAGTGAACC
GACGATCAGTCCCAATGTGCAGCGTATTGAACTACAGGTCAGTCTGGTCAATCAGGAGACTGGTCAAGTTGCATCCGGGA
TCAGCAGCTTGATGTTCTTTAATCATCGCATGAACAATACGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
73.333 |
81.081 |
0.595 |