Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACLKM3_RS04185 Genome accession   NZ_CP183897
Coordinates   884472..889031 (+) Length   1519 a.a.
NCBI ID   WP_019837494.1    Uniprot ID   -
Organism   Acinetobacter towneri strain M10_NDM     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 879472..894031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM3_RS04160 - 879933..880514 (-) 582 WP_171066656.1 hypothetical protein -
  ACLKM3_RS04165 pilG 880853..881236 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  ACLKM3_RS04170 - 881273..881641 (+) 369 WP_019837497.1 response regulator -
  ACLKM3_RS04175 - 881645..882181 (+) 537 WP_019837496.1 chemotaxis protein CheW -
  ACLKM3_RS04180 - 882227..884302 (+) 2076 WP_019837495.1 methyl-accepting chemotaxis protein -
  ACLKM3_RS04185 chpA 884472..889031 (+) 4560 WP_019837494.1 Hpt domain-containing protein Regulator
  ACLKM3_RS04190 - 889035..889493 (+) 459 WP_019837493.1 hypothetical protein -
  ACLKM3_RS04195 dapE 889576..890709 (-) 1134 WP_019837492.1 succinyl-diaminopimelate desuccinylase -
  ACLKM3_RS04200 - 890850..890996 (-) 147 WP_019837491.1 entericidin A/B family lipoprotein -
  ACLKM3_RS04205 - 891057..892001 (-) 945 WP_019837490.1 DUF1853 family protein -
  ACLKM3_RS04210 - 892089..892469 (+) 381 WP_019837489.1 YbaN family protein -
  ACLKM3_RS04215 elsL 892479..893003 (+) 525 WP_019837488.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1519 a.a.        Molecular weight: 168697.39 Da        Isoelectric Point: 4.2485

>NTDB_id=1107012 ACLKM3_RS04185 WP_019837494.1 884472..889031(+) (chpA) [Acinetobacter towneri strain M10_NDM]
MKEILKNLVETMTLLEDSYLEQDAEILEIFVEEIEEIFEELNPLFTTWFANPTDQETLVTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVLSGTVTLNTDIQKYAKTVFNLYQYKLYPIFKQVGLIDLDLRPLVLLGQQLQQNQTPEPALEELLVL
ADQLTATDMPTGLELADAAVETAVESSEDVMTAEEMSQTEVAQEAAADASLLAETLAIFVEEAEEHLATIDQFLAQDQIH
SQDYNGLIRALHTLRGSSSMAQIDQVFQASSKVENLFKTFVQDEIESTSKETALLVQYAEFVRDYLHVLRQGYCDGLDVI
YATFSKAWDSYGFSTSDTEDSNPQGLVSRLIELNIDRLLDAEFEFDKLAQAQFPSYLEELSAQAQLLVEHTDNRASVGIH
QFTEELKAAYDSVLAKPILLNSEYGYELFAQAHQEFIHLFDTLAAGQRVTVTEDIQKTLNDLTAFVQQDIDAIALEDAET
SVSDNAVERAVVAEPDVASAVVASESSGTVNLAQLSQRIASDQQNMHADDANKDFDPELLDIFLEEAEELLVGMDEDVNT
WSKDASDTSALNNLMRYLHTLKGGANMISATHIGLIAHNLESIYERIINNQIVVSPALIQIIRLVQDDIADRIQTIRDER
VDYAATQSIAILGNIVSLAQGDADVSVTSAVTTAQPEQVIEAEEVDAQPELAAKALQDTTADLAEDDIAIADEASLEDAV
TASFEPVTQTASHEANAESEDEQLHSIVVETFREEAEEILDAADQRLKQWFEQRSDRSVLLQLQRAAHSLKGGARMAEIE
SVAQIAYQLESAFEQFAVHQFNSNVYDALLQTTLAWLRDAIFKADYTDYDSLKSSLSAMQFVDVSAQLPERLTHNDLLSP
SRSYEFVQGDGTEPPAMSGEWGETIKLDNSNEMIRISADLVEKMIDLSGENSINRSRIEMELGQLGGTLNEMELAIKRLA
DQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLADKIRDAEGLLLQQSRIQAE
IQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVNNTEGELDRTILERLVTPFEHMLRNAVDHGIEDPVQRAAAN
KSEVGKIELNITRQGTDVVVTFVDDGKGIDDAKIKEKALSLGLIKADQNLDKNEILQYIFHPGFTTAKSVTQISGRGVGL
DVVQSEIKALGGHVSVDSTLGQGTTFSIRVPTTVAVSDALMVKVGDQQFAVPLAQIDRIVRIAPTTLESYFNSNEDFFQI
DNQNYKLRYLSEFVGNQPLPRLSHVGHSLPVLLIKGSTGQSIALLVDQLIGSRGQIVVKPIGQQFSSIGAIAGATILGDG
QVCLILDGQNIARQILATHRTKQASDQRDIQRRDTRRLIMIVDDSVTVRKVTSRLLERQGYDIVTAKDGIDAMEQLENVK
PDLMLLDIEMPRMDGFEVTNLVRHHDMHNNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEQLLAVSQG

Nucleotide


Download         Length: 4560 bp        

>NTDB_id=1107012 ACLKM3_RS04185 WP_019837494.1 884472..889031(+) (chpA) [Acinetobacter towneri strain M10_NDM]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACAATGACGCTTCTTGAAGATAGTTATCTTGAGCAAGATGCAGAAATTCT
TGAAATTTTTGTCGAAGAAATTGAAGAAATCTTCGAAGAATTAAATCCATTATTTACAACTTGGTTTGCCAACCCAACAG
ATCAAGAAACTTTAGTGACTATTCGTCGTCACTTTCACACTTTAAAAGGCTCGGGTCGCATGGTGGGTGCGAAGTCTGCG
GGCGAATTGGCATGGACGGTTGAAGATACTTTAAACCGTGTGCTTTCGGGTACGGTAACACTCAATACTGATATTCAAAA
ATACGCAAAAACTGTTTTCAATCTTTATCAATACAAGCTTTATCCAATTTTTAAACAAGTCGGTTTAATTGATCTTGATT
TACGCCCATTGGTGCTTTTAGGACAACAATTACAGCAAAACCAAACTCCTGAACCTGCACTGGAAGAGTTGCTAGTTCTA
GCGGATCAACTGACTGCAACTGATATGCCGACAGGACTAGAGTTGGCGGATGCTGCAGTTGAAACAGCAGTTGAATCATC
TGAAGATGTAATGACAGCTGAAGAAATGTCTCAGACAGAAGTTGCACAAGAAGCGGCTGCTGATGCGAGCCTATTGGCTG
AAACTCTGGCTATTTTTGTGGAAGAAGCTGAAGAGCATTTAGCGACCATTGATCAGTTCTTGGCGCAAGATCAGATTCAC
TCACAAGACTATAATGGCTTAATCCGTGCTTTACATACACTGCGCGGCAGTTCGTCTATGGCGCAAATTGATCAAGTTTT
TCAAGCCAGTTCTAAAGTTGAAAACTTGTTTAAAACATTTGTGCAAGATGAAATTGAATCCACCTCTAAAGAAACTGCGC
TGTTGGTGCAATACGCAGAATTTGTCCGTGATTATCTGCATGTACTTCGCCAAGGTTACTGTGATGGTTTAGATGTTATC
TATGCAACTTTTAGTAAAGCATGGGATAGCTACGGCTTTAGCACCAGCGATACAGAAGACTCTAATCCTCAAGGTTTGGT
ATCGAGACTCATCGAACTGAATATTGATCGTTTACTTGATGCTGAATTTGAATTTGATAAATTGGCGCAAGCGCAATTCC
CAAGCTATTTAGAAGAACTCAGCGCACAAGCGCAATTATTGGTAGAGCATACTGATAACCGTGCATCAGTGGGTATCCAT
CAATTTACTGAAGAACTTAAAGCAGCTTACGACAGTGTTTTAGCTAAGCCAATTTTGCTTAACTCTGAATATGGTTATGA
GTTATTTGCACAGGCGCACCAAGAGTTTATTCATTTATTTGATACCTTGGCTGCGGGACAGCGTGTTACGGTTACTGAAG
ATATTCAGAAAACCTTAAATGACTTAACTGCATTCGTGCAGCAAGACATTGATGCAATTGCACTTGAAGATGCAGAAACA
TCGGTGAGCGACAATGCTGTAGAAAGAGCAGTTGTTGCAGAACCTGATGTGGCGTCTGCTGTAGTTGCTAGCGAAAGTTC
GGGCACGGTGAATTTAGCGCAATTGTCACAACGTATTGCATCAGATCAACAAAACATGCATGCCGATGATGCCAATAAAG
ACTTCGATCCTGAATTGCTGGATATCTTTTTGGAAGAAGCTGAAGAGCTTTTGGTGGGTATGGATGAAGACGTCAATACT
TGGTCAAAAGACGCCAGCGACACTTCGGCTTTAAACAACTTAATGCGTTATTTGCACACTTTGAAAGGTGGCGCAAATAT
GATTTCTGCGACGCATATTGGTTTAATTGCACACAACCTCGAGTCGATTTACGAGCGTATCATTAACAACCAAATTGTTG
TATCACCTGCGTTAATTCAAATTATCCGTTTGGTGCAAGATGATATTGCAGACCGTATTCAGACCATTCGCGATGAGCGT
GTGGACTATGCTGCGACACAGTCAATTGCTATTTTAGGCAACATTGTCAGCTTGGCACAAGGCGATGCAGATGTGTCAGT
CACAAGTGCTGTAACTACAGCGCAGCCTGAACAGGTGATCGAAGCAGAAGAGGTTGATGCACAGCCTGAGTTGGCAGCAA
AAGCCTTGCAAGACACGACTGCAGATTTAGCTGAAGATGATATCGCTATTGCTGATGAGGCAAGTCTGGAAGATGCTGTT
ACTGCGTCATTTGAACCGGTAACACAAACTGCAAGTCATGAAGCAAATGCTGAATCTGAAGATGAGCAATTACATTCAAT
TGTGGTTGAAACTTTCCGAGAAGAAGCGGAAGAAATTTTGGATGCTGCAGATCAGCGCTTGAAACAATGGTTTGAGCAGC
GTAGTGACCGTAGTGTCTTGCTTCAATTACAACGTGCGGCGCACAGCTTAAAAGGCGGTGCACGTATGGCTGAAATTGAA
TCTGTTGCGCAAATTGCCTATCAACTTGAAAGTGCCTTTGAACAGTTTGCAGTGCATCAATTTAACTCAAATGTTTATGA
TGCCTTGCTGCAAACCACATTAGCATGGTTGCGTGATGCAATTTTCAAAGCAGATTACACTGATTATGACAGTTTAAAAT
CTAGCTTATCGGCGATGCAGTTTGTAGATGTATCTGCACAATTGCCTGAGCGGTTAACGCATAACGACTTGTTATCACCA
AGCCGTAGTTATGAGTTTGTTCAGGGTGATGGTACAGAACCACCTGCAATGTCAGGTGAGTGGGGCGAAACCATAAAACT
AGATAACAGCAATGAGATGATTCGTATCTCGGCCGATTTAGTCGAGAAGATGATTGACTTGTCAGGCGAGAACTCGATTA
ACCGTTCACGTATTGAAATGGAGCTAGGGCAACTGGGCGGTACGTTGAATGAGATGGAATTGGCGATTAAACGACTTGCC
GATCAGTTACGTCGAATGGAAGGCGAGCTAGAATCGCAAATTATTGCCAAACATGGTTCTGAAAACTCACGTTATGCAGA
CTTTGACCCATTAGAGATGGACCAATATTCATCGTTGAATCAGTTGTCTAAATCTCTGGCAGAATCTGCATCGGACTTGG
TGGACTTTAAGAGCACATTGGCTGACAAAATCCGTGATGCCGAAGGTTTGTTATTACAACAATCACGTATTCAGGCCGAA
ATTCAAGAAAGCTTGATGCGTACACGCCTTGTACCATTCTCGCGTTTATTGCCACGCTTACAACGTATTGTGCGTCAGAC
TTCATCGACCTTGAACCGTCCGACAGAATTGGTGGTTAATAACACTGAAGGTGAATTAGACCGTACTATTCTAGAACGTT
TGGTGACACCTTTTGAACACATGCTGCGTAATGCGGTAGACCATGGTATTGAAGACCCTGTGCAACGTGCTGCTGCTAAT
AAATCTGAGGTTGGTAAAATTGAACTGAACATCACCCGCCAAGGTACAGATGTTGTGGTGACTTTTGTGGATGATGGTAA
GGGTATTGATGATGCCAAGATTAAAGAAAAAGCATTGAGCTTAGGTTTAATCAAAGCTGATCAGAATTTAGATAAAAATG
AAATTCTGCAATACATTTTCCACCCAGGTTTTACGACAGCAAAATCGGTTACACAAATTTCAGGTCGTGGTGTGGGCTTA
GATGTGGTACAAAGTGAAATTAAGGCACTTGGTGGTCACGTATCAGTAGATTCAACATTGGGTCAAGGTACAACCTTCAG
TATTCGCGTACCAACCACGGTTGCGGTATCTGATGCCTTAATGGTAAAAGTTGGTGATCAACAATTTGCTGTACCGTTAG
CGCAAATTGACCGTATTGTACGTATAGCACCAACGACCTTGGAATCTTACTTCAACAGCAATGAAGATTTCTTCCAAATT
GATAACCAGAACTATAAGTTACGTTACTTATCTGAGTTCGTTGGTAATCAGCCATTGCCGCGTTTAAGCCATGTGGGTCA
TTCACTACCAGTTCTGTTAATTAAAGGCAGTACAGGTCAAAGTATTGCCTTACTAGTTGATCAGTTGATTGGTTCGCGTG
GTCAAATTGTTGTGAAGCCAATTGGACAACAGTTCTCAAGCATTGGTGCAATTGCAGGCGCAACCATTTTGGGTGATGGT
CAAGTTTGTTTGATTTTGGATGGTCAGAATATAGCCCGTCAAATTCTTGCAACGCACCGAACTAAACAAGCCAGCGATCA
ACGTGATATCCAACGTCGTGATACACGTCGCTTAATTATGATTGTGGATGACTCAGTCACCGTACGTAAAGTAACTTCAC
GTCTGCTTGAGCGTCAAGGTTATGACATCGTGACCGCCAAAGATGGTATCGATGCCATGGAGCAGCTTGAAAACGTCAAA
CCTGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTTGAGGTAACTAACCTCGTACGCCACCACGATAT
GCATAACAATCTGCCAATCATCATGATTACGTCCCGTACAGGTGAAAAACACCGTGAGCGCGCGTTTAGCTTAGGTGTGA
CACACTACATGGGTAAACCGTTCCAAGAGGCAGAATTACTTGCCAATATTGAACAACTATTAGCAGTCAGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.677

100

0.614


Multiple sequence alignment