Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACLKM5_RS12815 | Genome accession | NZ_CP183893 |
| Coordinates | 2674157..2674792 (-) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain D10_NDM_tet(X3) | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2669157..2679792
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKM5_RS12795 | aroK | 2670136..2670678 (-) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| ACLKM5_RS12800 | pilQ | 2670715..2672853 (-) | 2139 | WP_411687493.1 | type IV pilus secretin PilQ | Machinery gene |
| ACLKM5_RS12805 | pilP | 2672914..2673441 (-) | 528 | WP_045795346.1 | pilus assembly protein PilP | Machinery gene |
| ACLKM5_RS12810 | pilO | 2673441..2674160 (-) | 720 | WP_411687462.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACLKM5_RS12815 | pilN | 2674157..2674792 (-) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| ACLKM5_RS12820 | pilM | 2674792..2675850 (-) | 1059 | WP_411687461.1 | pilus assembly protein PilM | Machinery gene |
| ACLKM5_RS12825 | ponA | 2676022..2678598 (+) | 2577 | WP_411687460.1 | penicillin-binding protein PBP1a | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=1106949 ACLKM5_RS12815 WP_005180516.1 2674157..2674792(-) (pilN) [Acinetobacter indicus strain D10_NDM_tet(X3)]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=1106949 ACLKM5_RS12815 WP_005180516.1 2674157..2674792(-) (pilN) [Acinetobacter indicus strain D10_NDM_tet(X3)]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGTCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGTCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |