Detailed information NTG1106915

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACLKM5_RS01070
• Genome accession: NZ_CP183893
• Coordinates: 229569..230924 (-)
• Length: 451 a.a.
• NCBI ID: WP_042119426.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain D10_NDM_tet(X3)
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 224569..235924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM5_RS01055	lptG	225623..226693 (+)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-
ACLKM5_RS01060	gpmI	226812..228359 (+)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACLKM5_RS01065	-	228383..229552 (+)	1170	WP_160241704.1	S41 family peptidase	-
ACLKM5_RS01070	pilR	229569..230924 (-)	1356	WP_042119426.1	sigma-54-dependent transcriptional regulator	Regulator
ACLKM5_RS01075	pilS	230996..232564 (-)	1569	WP_104489117.1	sensor histidine kinase	Regulator
ACLKM5_RS01080	-	232579..233214 (-)	636	WP_005181577.1	response regulator	-
ACLKM5_RS01085	-	233432..234514 (+)	1083	WP_127799456.1	serine hydrolase	-
ACLKM5_RS01090	thrC	234608..235753 (-)	1146	WP_005181581.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50637.33 Da
• Isoelectric Point: 6.7145

>NTDB_id=1106915 ACLKM5_RS01070 WP_042119426.1 229569..230924(-) (pilR) [Acinetobacter indicus strain D10_NDM_tet(X3)]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=1106915 ACLKM5_RS01070 WP_042119426.1 229569..230924(-) (pilR) [Acinetobacter indicus strain D10_NDM_tet(X3)]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGATGCTTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGTCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATTAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGTCTGATTCAATCGGCACACG
GCGGTAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTAGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGTTGCCACCGCTACGTG
AGCGTGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCGTTACGCAAGATGGCGCCACTGG
CCGAGCCAGAAACCGACACTGCAACACCGGTTACAGCTGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGACCCTAGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501