Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACLKM6_RS10235 Genome accession   NZ_CP183890
Coordinates   2124108..2128601 (-) Length   1497 a.a.
NCBI ID   WP_411686836.1    Uniprot ID   -
Organism   Acinetobacter indicus strain D11_NDM_tet(X5)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2119108..2133601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM6_RS10205 elsL 2120164..2120694 (-) 531 WP_104488696.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ACLKM6_RS10210 - 2120691..2121080 (-) 390 WP_075167111.1 YbaN family protein -
  ACLKM6_RS10215 - 2121171..2122073 (+) 903 WP_411686835.1 DUF1853 family protein -
  ACLKM6_RS10220 - 2122174..2122320 (+) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  ACLKM6_RS10225 dapE 2122448..2123581 (+) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  ACLKM6_RS10230 - 2123650..2124111 (-) 462 WP_075167114.1 hypothetical protein -
  ACLKM6_RS10235 chpA 2124108..2128601 (-) 4494 WP_411686836.1 Hpt domain-containing protein Regulator
  ACLKM6_RS10240 - 2128758..2130830 (-) 2073 WP_087662228.1 methyl-accepting chemotaxis protein -
  ACLKM6_RS10245 - 2130876..2131412 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  ACLKM6_RS10250 - 2131416..2131784 (-) 369 WP_005179539.1 response regulator -
  ACLKM6_RS10255 pilG 2131801..2132184 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  ACLKM6_RS10260 - 2132514..2133107 (+) 594 WP_171525083.1 hypothetical protein -

Sequence


Protein


Download         Length: 1497 a.a.        Molecular weight: 166810.23 Da        Isoelectric Point: 4.2905

>NTDB_id=1106895 ACLKM6_RS10235 WP_411686836.1 2124108..2128601(-) (chpA) [Acinetobacter indicus strain D11_NDM_tet(X5)]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAVDTELAVADSIEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETGTIEAVTETVEA
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEQPAPAETAYTAPEDEQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDNL
HSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSN
AYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNATDLLAPSKTFEFVQGDGAEPPSMQGEWSET
AQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSR
YTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIV
RQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTD
DGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGT
TFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSN
IAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHV
MEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRH
HDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=1106895 ACLKM6_RS10235 WP_411686836.1 2124108..2128601(-) (chpA) [Acinetobacter indicus strain D11_NDM_tet(X5)]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCTGGACGCATGGTTGGTGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGACC
TGCGTCCATTGGTGCTATTAGGACAACAACTACAACAAAATTTAAGTCCTGAACCGGCCTTAGAAGAACTTCTACAACTG
GCGAGCAGCCTAACATCCAGCGACAGTATTACTGGTCTGGAGTTTGATACAGCAAGTACTGATGAGCAGGTTGCTGTAGA
CACCGAGCTGGCTGTGGCTGATAGTATTGAAGAAGATCCGTTAGCGGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACAGTGGATCGCTTCCTGGCACATGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACTTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACCTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAAGATGCTCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGGCACCATAGAAGCTGTCACCGAAACGGTTGAAGCC
GGTGCCGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAGATGAG
CGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATACTGCGCCTGAAGATGAGCAGCCAGACACCAGCAGCGAACCGGTACTGG
AAGATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAATCTG
CATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGTTGCTCGATACCACAGAAAGCCTGTTAAAGCAGTGGTT
TGACCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGGCCG
AAATCGAGCCGGTGGCCGTGATTGCTTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCCAAT
GCCTATGATGCCTTGCTCAACACCACTGTCGCCTGGTTAAAAGAAGCCATCTTCCAGCGTGATTACAGCAATTTTGACAG
CCTGAAAGCTAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCACAGCTGCCAGAACGCTTTAATGCTACCGATTTGC
TGGCACCAAGCAAAACCTTCGAATTTGTACAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGTGAATGGAGCGAAACC
GCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAA
CGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAAC
GTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGC
TATACCGACTTCGACCCGCTGGAGATGGACCAGTACTCCTCCTTGAACCAGCTGTCAAAATCGTTGGCGGAATCGGCGTC
GGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAGTCGCGGATTC
AGGCAGAAATTCAGGAAAGCCTGATGCGTACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTG
CGTCAGACCTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCATTCT
GGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTAAAC
AGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGAT
GATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCTGGA
CAAGAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAGATTTCAGGTCGTGGCG
TCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACC
ACCTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCCTGATGGTAAAAGTTGGCGATCAGCAGTTTGCAAT
TCCATTGGCGCAAATTGACCGTATTGTACGAATTTCGCCTTCTGCACTGGAAAGTTACTTCAGCAGCAAAGATGATTACT
TCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTACCACGGTTAAGCAAT
ATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTGGATCAGCTGATTGG
TTCACGTGGCCAGATTGTGATGAAACCGATTGGGCAGCAGTTTTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTCTTG
GTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCATGTG
ATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAAGGT
CACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGGAAA
ATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGCCAC
CATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTT
GGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTG
AGGCTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.904

100

0.621


Multiple sequence alignment