Detailed information NTG1106874

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACLKM6_RS00840
• Genome accession: NZ_CP183890
• Coordinates: 182833..184188 (-)
• Length: 451 a.a.
• NCBI ID: WP_042119426.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain D11_NDM_tet(X5)
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 177833..189188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM6_RS00825	lptG	178885..179955 (+)	1071	WP_286422537.1	LPS export ABC transporter permease LptG	-
ACLKM6_RS00830	gpmI	180074..181621 (+)	1548	WP_411687073.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACLKM6_RS00835	-	181645..182814 (+)	1170	WP_411687074.1	S41 family peptidase	-
ACLKM6_RS00840	pilR	182833..184188 (-)	1356	WP_042119426.1	sigma-54-dependent transcriptional regulator	Regulator
ACLKM6_RS00845	pilS	184260..185828 (-)	1569	WP_104489117.1	sensor histidine kinase	Regulator
ACLKM6_RS00850	-	185843..186478 (-)	636	WP_005181577.1	response regulator	-
ACLKM6_RS00855	-	186696..187778 (+)	1083	WP_127799456.1	serine hydrolase	-
ACLKM6_RS00860	thrC	187872..189017 (-)	1146	WP_411687075.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50637.33 Da
• Isoelectric Point: 6.7145

>NTDB_id=1106874 ACLKM6_RS00840 WP_042119426.1 182833..184188(-) (pilR) [Acinetobacter indicus strain D11_NDM_tet(X5)]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=1106874 ACLKM6_RS00840 WP_042119426.1 182833..184188(-) (pilR) [Acinetobacter indicus strain D11_NDM_tet(X5)]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGCCAGTTACTGTCCAG
TCATCACTATGATGCCTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTACCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGAGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTACTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATTAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGTCTGATTCAATCGGCACACG
GCGGTAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTAATGGATATTGTGCTGCCACCGCTACGTG
AGCGCGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCCTTACGCAAGATGGCGCCACTGG
CCGAGCCAGAAACCGACACTGCAACACCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGGCTGAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501