Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | ACGHCW_RS03025 | Genome accession | NZ_AP031614 |
| Coordinates | 612138..612752 (-) | Length | 204 a.a. |
| NCBI ID | WP_005446268.1 | Uniprot ID | A0A9X3MGU4 |
| Organism | Vibrio harveyi strain TUMSAT-2019 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 607138..617752
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGHCW_RS03015 (VHTUMSATKI_05150) | aceF | 608241..610142 (+) | 1902 | WP_050921460.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| ACGHCW_RS03020 (VHTUMSATKI_05160) | lpdA | 610386..611816 (+) | 1431 | WP_005446266.1 | dihydrolipoyl dehydrogenase | - |
| ACGHCW_RS03025 (VHTUMSATKI_05170) | opaR | 612138..612752 (-) | 615 | WP_005446268.1 | transcriptional regulator OpaR | Regulator |
| ACGHCW_RS03030 (VHTUMSATKI_05180) | hpt | 613074..613604 (+) | 531 | WP_005446271.1 | hypoxanthine phosphoribosyltransferase | - |
| ACGHCW_RS03035 (VHTUMSATKI_05190) | can | 613693..614361 (-) | 669 | WP_005446273.1 | carbonate dehydratase | - |
| ACGHCW_RS03040 (VHTUMSATKI_05200) | - | 614645..616315 (+) | 1671 | WP_005446275.1 | SulP family inorganic anion transporter | - |
| ACGHCW_RS03045 (VHTUMSATKI_05210) | - | 616549..617466 (+) | 918 | WP_005446278.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23559.82 Da Isoelectric Point: 6.0756
>NTDB_id=110667 ACGHCW_RS03025 WP_005446268.1 612138..612752(-) (opaR) [Vibrio harveyi strain TUMSAT-2019]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPE
HLANLFHGICYSIFVQANRSKSEAELSTLVSAYLDMLCIYNRDH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPE
HLANLFHGICYSIFVQANRSKSEAELSTLVSAYLDMLCIYNRDH
Nucleotide
Download Length: 615 bp
>NTDB_id=110667 ACGHCW_RS03025 WP_005446268.1 612138..612752(-) (opaR) [Vibrio harveyi strain TUMSAT-2019]
ATGGACTCAATTGCAAAGAGACCTCGTACTAGGCTTTCCCCTCTAAAACGTAAACAGCAACTAATGGAAATCGCTCTTGA
AGTGTTTGCTCGTCGCGGCATTGGTCGTGGTGGTCACGCTGATATTGCAGAAATTGCTCAAGTTTCTGTTGCGACAGTAT
TTAACTACTTCCCAACTCGCGAAGACTTGGTGGATGAAGTTCTGAATCACGTGGTTCGTCAATTCTCGAACTTCTTATCA
GATAACATCGACTTAGACATTCATGCACGCGAGAACATCGCTAACATCACTAACGCAATGATTGAACTAGTAAGCCAAGA
TTGCCATTGGTTGAAAGTTTGGTTCGAGTGGAGTGCATCAACACGTGATGAAGTGTGGCCACTATTCGTAACGACAAACC
GCACCAACCAACTGCTGGTGCAAAACATGTTCATCAAAGCTATCGAACGTGGGGAAGTTTGTGACCAACATGAACCGGAA
CACTTGGCGAATCTGTTCCATGGTATTTGTTACTCTATCTTCGTACAAGCAAATCGCTCTAAGAGCGAAGCCGAGCTATC
AACACTCGTTAGTGCTTACCTAGATATGTTGTGCATCTACAACCGCGATCACTAA
ATGGACTCAATTGCAAAGAGACCTCGTACTAGGCTTTCCCCTCTAAAACGTAAACAGCAACTAATGGAAATCGCTCTTGA
AGTGTTTGCTCGTCGCGGCATTGGTCGTGGTGGTCACGCTGATATTGCAGAAATTGCTCAAGTTTCTGTTGCGACAGTAT
TTAACTACTTCCCAACTCGCGAAGACTTGGTGGATGAAGTTCTGAATCACGTGGTTCGTCAATTCTCGAACTTCTTATCA
GATAACATCGACTTAGACATTCATGCACGCGAGAACATCGCTAACATCACTAACGCAATGATTGAACTAGTAAGCCAAGA
TTGCCATTGGTTGAAAGTTTGGTTCGAGTGGAGTGCATCAACACGTGATGAAGTGTGGCCACTATTCGTAACGACAAACC
GCACCAACCAACTGCTGGTGCAAAACATGTTCATCAAAGCTATCGAACGTGGGGAAGTTTGTGACCAACATGAACCGGAA
CACTTGGCGAATCTGTTCCATGGTATTTGTTACTCTATCTTCGTACAAGCAAATCGCTCTAAGAGCGAAGCCGAGCTATC
AACACTCGTTAGTGCTTACCTAGATATGTTGTGCATCTACAACCGCGATCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
95.588 |
100 |
0.956 |
| hapR | Vibrio cholerae C6706 |
71.717 |
97.059 |
0.696 |
| hapR | Vibrio cholerae strain A1552 |
71.717 |
97.059 |
0.696 |