Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACN6IY_RS07255 Genome accession   NZ_CP183811
Coordinates   1529465..1531234 (+) Length   589 a.a.
NCBI ID   WP_419727233.1    Uniprot ID   -
Organism   Terrisporobacter petrolearius strain IIB7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1524465..1536234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6IY_RS07230 - 1524905..1525843 (-) 939 WP_419727229.1 LysR family transcriptional regulator -
  ACN6IY_RS07235 - 1526023..1527213 (+) 1191 WP_419727230.1 M20 metallopeptidase family protein -
  ACN6IY_RS07240 - 1527247..1527460 (-) 214 Protein_1416 transposase -
  ACN6IY_RS07245 - 1527570..1528628 (-) 1059 WP_419727231.1 sensor histidine kinase -
  ACN6IY_RS07250 - 1528618..1529295 (-) 678 WP_419727232.1 response regulator transcription factor -
  ACN6IY_RS07255 rcrP 1529465..1531234 (+) 1770 WP_419727233.1 ABC transporter ATP-binding protein Regulator
  ACN6IY_RS07260 rcrQ 1531227..1532990 (+) 1764 WP_419727234.1 ABC transporter ATP-binding protein Regulator
  ACN6IY_RS07265 - 1533271..1534599 (+) 1329 WP_419727235.1 protein kinase domain-containing protein -
  ACN6IY_RS07270 - 1534938..1535435 (+) 498 WP_419727236.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65951.71 Da        Isoelectric Point: 7.9668

>NTDB_id=1106253 ACN6IY_RS07255 WP_419727233.1 1529465..1531234(+) (rcrP) [Terrisporobacter petrolearius strain IIB7]
MLKILKYLTKKDWMFVLCSFLFVVVQVYLDLRLPDYMSEITRLVQTPNSEMSEILSAGGYMLLCAFGSLIAAFIVGYFAA
QIASNLSWKLRSSVYDKIEGFSMAEINKFSTPSLITRSTNDITQIQNIVAMGLQLIIKAPITAVWAVCKILDKGWQWSGA
TGGAILVLVLIILVIMIFALPRFKKIQKLTDRLNLVTRENLTGIRVVRAYNAENYQNSKFENVNEEITKNNLVINRVMSI
MQPGMMFVMNGLTLAIYWIGAYLINDANIMDKMNLFSDMIVFSSYSMQVIMAFMMLTMIFIMMPRASVSAKRILEVLNTK
ESIVDGDGKFEETSKTGEIEFKNVSFKYPDSQGSDYVLRDINFTAKMGETVAIIGSTGSGKTSLINLIPRFYDVTEGEVL
VNGVNVKKYKQKELNNLLGYVHQKAVLFSGDITSNVAYGNNGKENYSELDVKRAVEIAQGTEFVDNMENTYNASISQGGS
NVSGGQKQRLSIARAICRKAEIYIFDDSFSALDYKTDRKLRSVLKHEISNATNLIVAQRIGTIIDADKIIVLDEGQIAGM
GTHNELMKKCEVYQEIAYSQLSKEELANA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1106253 ACN6IY_RS07255 WP_419727233.1 1529465..1531234(+) (rcrP) [Terrisporobacter petrolearius strain IIB7]
ATGTTAAAGATATTAAAATATTTAACAAAAAAAGACTGGATGTTTGTACTTTGCAGCTTTTTATTTGTAGTAGTGCAAGT
ATATCTTGATTTAAGACTACCAGATTATATGTCGGAAATAACAAGGTTAGTTCAGACACCAAATAGTGAAATGAGTGAAA
TATTAAGTGCTGGAGGTTATATGCTACTGTGTGCCTTTGGTAGTTTAATAGCAGCTTTTATAGTAGGTTATTTTGCAGCC
CAAATAGCTTCGAATTTATCATGGAAACTTCGTTCAAGTGTATACGATAAAATAGAAGGATTTTCAATGGCTGAAATTAA
TAAATTTTCTACACCTAGTTTAATAACACGTTCAACTAATGATATTACTCAAATTCAAAATATTGTGGCTATGGGGCTTC
AATTAATAATAAAAGCTCCTATTACAGCAGTTTGGGCAGTTTGTAAAATTCTAGATAAAGGATGGCAATGGAGTGGCGCC
ACTGGTGGAGCCATATTAGTGTTAGTATTAATTATCTTAGTAATAATGATATTTGCCTTACCTAGATTTAAAAAGATTCA
AAAATTAACTGACAGGCTTAACTTAGTAACAAGGGAAAATTTAACAGGAATACGTGTAGTTCGTGCATATAATGCAGAAA
ACTATCAAAATAGCAAATTTGAAAATGTAAATGAAGAGATAACTAAAAACAACTTAGTAATAAATAGAGTTATGTCAATA
ATGCAACCAGGAATGATGTTTGTTATGAATGGATTAACACTTGCCATATACTGGATAGGTGCTTATTTAATAAATGATGC
AAATATTATGGATAAAATGAATTTATTTAGTGATATGATAGTCTTCTCATCTTATTCAATGCAGGTAATAATGGCATTTA
TGATGTTAACAATGATATTTATAATGATGCCAAGAGCTTCAGTTTCAGCCAAACGTATACTTGAAGTATTAAATACAAAA
GAAAGTATAGTTGATGGAGATGGAAAATTTGAAGAAACTTCAAAAACTGGGGAAATAGAATTCAAAAATGTTAGCTTTAA
ATATCCTGATTCACAAGGTTCAGACTATGTACTTCGTGATATAAACTTTACTGCTAAAATGGGTGAAACAGTTGCCATAA
TTGGATCCACAGGAAGTGGGAAAACTTCTTTAATAAATTTAATACCAAGGTTTTATGATGTTACAGAAGGTGAAGTACTA
GTAAATGGAGTTAATGTAAAAAAATATAAACAAAAGGAACTAAACAATCTTTTAGGGTACGTTCATCAAAAGGCAGTGTT
ATTTTCTGGAGATATAACTTCAAACGTAGCTTATGGTAATAATGGCAAGGAAAATTACTCTGAGTTAGACGTGAAAAGAG
CTGTAGAAATAGCCCAAGGAACTGAATTTGTTGATAATATGGAAAACACTTACAATGCAAGTATTTCTCAAGGGGGAAGT
AACGTATCGGGAGGACAAAAGCAAAGATTATCCATAGCAAGAGCAATATGTAGAAAGGCTGAAATATATATATTTGACGA
TTCTTTTTCAGCACTTGACTATAAAACTGATAGAAAACTTAGATCTGTATTAAAACATGAAATATCTAATGCTACAAATT
TAATAGTAGCACAACGTATAGGTACTATAATTGATGCAGACAAAATAATAGTTCTAGATGAAGGACAAATAGCAGGTATG
GGAACTCACAATGAACTTATGAAAAAATGTGAAGTCTATCAAGAAATAGCATATTCTCAGCTTTCAAAGGAGGAGTTAGC
CAATGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(358-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.248

100

0.523

Multiple sequence alignment