Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACN6IY_RS07260 Genome accession   NZ_CP183811
Coordinates   1531227..1532990 (+) Length   587 a.a.
NCBI ID   WP_419727234.1    Uniprot ID   -
Organism   Terrisporobacter petrolearius strain IIB7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1526227..1537990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6IY_RS07240 - 1527247..1527460 (-) 214 Protein_1416 transposase -
  ACN6IY_RS07245 - 1527570..1528628 (-) 1059 WP_419727231.1 sensor histidine kinase -
  ACN6IY_RS07250 - 1528618..1529295 (-) 678 WP_419727232.1 response regulator transcription factor -
  ACN6IY_RS07255 rcrP 1529465..1531234 (+) 1770 WP_419727233.1 ABC transporter ATP-binding protein Regulator
  ACN6IY_RS07260 rcrQ 1531227..1532990 (+) 1764 WP_419727234.1 ABC transporter ATP-binding protein Regulator
  ACN6IY_RS07265 - 1533271..1534599 (+) 1329 WP_419727235.1 protein kinase domain-containing protein -
  ACN6IY_RS07270 - 1534938..1535435 (+) 498 WP_419727236.1 GNAT family N-acetyltransferase -
  ACN6IY_RS07275 - 1535536..1536768 (+) 1233 WP_419727237.1 VanW family protein -
  ACN6IY_RS07280 - 1536881..1537423 (+) 543 WP_419727238.1 NADH peroxidase -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64771.20 Da        Isoelectric Point: 6.6951

>NTDB_id=1106254 ACN6IY_RS07260 WP_419727234.1 1531227..1532990(+) (rcrQ) [Terrisporobacter petrolearius strain IIB7]
MLNKNKQKSQGSLGNLLAYMKKYSFVLILAFIFAIGGSIITVISPDKLSEVTDLITKGIVTGINMDKISSICLTLAGLYG
ISVVLSYLQGFIMATVTQKTTKELRSDISNKMNKLPLKYFDKTTVGDVLSRMTNDVDTIGQTLNQSIGTLVSAISLLLGS
LYMMTTTNITLTITAVVSTIIGFGLMMLIISKSQKHFVNQQRYLGEINGYIEEAYTGHGVMKVYNAGEETNKKFKLLNDN
LKQSAWKSQFISGLMMPLMAFIGNFGYVAVCVIGAVLAFNNKISFGVIVAFMMYIRFFTQPLAQFAQAATSLQSTSAACK
RVFEFLQEEEMEDESNKNISLENVEGHVKFEHVKFGYDKDKLIIKDFSADIKSGQKVAIVGPTGAGKTTLVNLLMKFYDV
NCGTIKIDEVPIQSLSREKVHELFCMVLQDTWLFEGTITENITYNKEDVSQSVIVSACKAVGIDHFIRTLPEGYDTILDD
NTNLSAGQKQLITIARAMVKNAPLLILDEATSSVDTRTELLIQEAMDKLTVGKTSFVIAHRLSTIKNAAVILVMKDGDII
ESGNHEELLSSNGFYAELYNSQFEKAS

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=1106254 ACN6IY_RS07260 WP_419727234.1 1531227..1532990(+) (rcrQ) [Terrisporobacter petrolearius strain IIB7]
ATGCTTAATAAAAATAAACAAAAGTCACAAGGTAGCTTAGGCAACTTATTGGCGTATATGAAAAAATATAGTTTTGTATT
AATTTTAGCCTTTATATTTGCCATAGGTGGATCAATAATAACAGTTATTAGTCCAGACAAATTAAGTGAAGTTACAGATT
TGATTACAAAAGGAATAGTAACTGGAATTAACATGGATAAGATATCTAGTATATGCTTAACATTGGCAGGATTATATGGT
ATTAGTGTTGTGTTATCTTATTTACAAGGTTTTATAATGGCAACAGTGACACAAAAGACTACTAAAGAGTTAAGAAGTGA
TATATCTAATAAAATGAATAAATTACCATTAAAATATTTCGATAAAACTACTGTTGGTGATGTTCTAAGTCGTATGACTA
ATGATGTGGATACAATAGGTCAAACTTTAAATCAAAGTATAGGGACTTTAGTAAGTGCCATATCTTTATTATTAGGCTCC
TTGTATATGATGACAACTACAAATATTACTTTAACAATTACAGCAGTAGTATCTACAATAATTGGTTTTGGATTAATGAT
GTTAATAATATCAAAATCTCAAAAACATTTCGTAAATCAACAACGTTATCTTGGAGAAATAAATGGATATATAGAAGAAG
CATATACTGGTCATGGTGTAATGAAAGTATATAATGCAGGTGAAGAAACAAATAAAAAATTTAAATTACTAAATGATAAT
CTTAAACAAAGTGCATGGAAATCGCAATTTATATCAGGTTTAATGATGCCTTTAATGGCCTTTATAGGTAACTTTGGATA
TGTGGCAGTTTGTGTTATAGGTGCAGTACTAGCTTTCAATAATAAAATAAGTTTTGGTGTAATAGTAGCATTTATGATGT
ATATTAGATTCTTTACACAGCCCCTTGCTCAATTTGCACAAGCAGCCACTTCTCTACAGTCAACATCAGCTGCATGTAAA
CGAGTATTTGAGTTTTTACAAGAAGAGGAAATGGAAGATGAAAGCAATAAAAACATATCTTTAGAAAATGTAGAAGGGCA
TGTTAAATTTGAACATGTAAAATTTGGATATGATAAAGATAAATTAATAATAAAAGATTTCTCTGCTGATATTAAATCAG
GACAAAAAGTTGCAATAGTAGGACCAACAGGAGCAGGTAAAACTACTTTAGTAAACTTATTAATGAAGTTTTATGACGTA
AATTGTGGAACAATAAAAATAGATGAAGTACCAATACAAAGTTTAAGTAGAGAAAAGGTACATGAGTTGTTCTGCATGGT
ACTTCAAGACACATGGTTGTTTGAAGGAACAATCACAGAAAATATAACTTACAATAAAGAGGATGTGTCACAATCAGTTA
TAGTATCTGCTTGTAAAGCTGTTGGAATAGACCATTTTATAAGAACTTTACCTGAAGGGTATGACACAATATTAGATGAT
AATACTAATTTATCTGCTGGTCAAAAACAGTTAATTACTATAGCCAGAGCAATGGTAAAAAATGCACCACTATTAATACT
AGATGAGGCAACAAGTTCTGTAGATACTCGTACAGAATTATTGATACAAGAGGCTATGGATAAATTAACAGTAGGAAAAA
CTTCATTTGTTATAGCTCATAGACTATCAACTATAAAAAACGCTGCTGTAATTTTAGTTATGAAAGATGGCGATATTATA
GAAAGTGGAAATCATGAAGAACTTTTAAGTTCAAATGGATTTTATGCAGAGCTTTACAATAGTCAATTTGAAAAAGCAAG
TTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(365-512)

ABC transporter transmembrane region (ABC_membrane)

(27-302)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

58.621

98.807

0.579

Multiple sequence alignment