Detailed information NTG1106110

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: ACM595_RS03140
• Genome accession: NZ_CP183796
• Coordinates: 653894..654868 (-)
• Length: 324 a.a.
• NCBI ID: WP_115338507.1
• Uniprot ID: -
• Organism: Staphylococcus sp. LKG3-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 648894..659868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM595_RS03110 (ACM595_03110)	gcvT	649429..650520 (-)	1092	WP_115338511.1	glycine cleavage system aminomethyltransferase GcvT	-
ACM595_RS03115 (ACM595_03115)	-	650704..651177 (-)	474	WP_002483192.1	shikimate kinase	-
ACM595_RS03120 (ACM595_03120)	comGF	651382..651825 (-)	444	WP_115338510.1	competence type IV pilus minor pilin ComGF	-
ACM595_RS03125 (ACM595_03125)	comGD	652083..652538 (-)	456	WP_228160939.1	competence type IV pilus minor pilin ComGD	-
ACM595_RS03130 (ACM595_03130)	comGC	652519..652830 (-)	312	WP_037538386.1	competence type IV pilus major pilin ComGC	Machinery gene
ACM595_RS03135 (ACM595_03135)	comGB	652858..653922 (-)	1065	WP_181876259.1	competence type IV pilus assembly protein ComGB	-
ACM595_RS03140 (ACM595_03140)	comGA	653894..654868 (-)	975	WP_115338507.1	competence type IV pilus ATPase ComGA	Machinery gene
ACM595_RS03145 (ACM595_03145)	-	654956..655579 (-)	624	WP_115338506.1	MBL fold metallo-hydrolase	-
ACM595_RS03150 (ACM595_03150)	-	655579..655905 (-)	327	WP_002483185.1	MTH1187 family thiamine-binding protein	-
ACM595_RS03155 (ACM595_03155)	-	655905..656891 (-)	987	WP_115338505.1	glucokinase	-
ACM595_RS03160 (ACM595_03160)	-	656895..657092 (-)	198	WP_037538382.1	YqgQ family protein	-
ACM595_RS03165 (ACM595_03165)	-	657076..658533 (-)	1458	WP_037538380.1	rhomboid family intramembrane serine protease	-
ACM595_RS03170 (ACM595_03170)	-	658545..659090 (-)	546	WP_115338504.1	5-formyltetrahydrofolate cyclo-ligase	-
ACM595_RS03175 (ACM595_03175)	rpmG	659299..659448 (-)	150	WP_002483181.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36634.90 Da
• Isoelectric Point: 9.7851

>NTDB_id=1106110 ACM595_RS03140 WP_115338507.1 653894..654868(-) (comGA) [Staphylococcus sp. LKG3-1]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKERLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI

Nucleotide

• Length: 975 bp

>NTDB_id=1106110 ACM595_RS03140 WP_115338507.1 653894..654868(-) (comGA) [Staphylococcus sp. LKG3-1]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCGGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTGCCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	62.037	100	0.62
comGA	Staphylococcus aureus N315	62.037	100	0.62