Detailed information NTG1105534

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACN429_RS06165
• Genome accession: NZ_CP183397
• Coordinates: 1332146..1334386 (+)
• Length: 746 a.a.
• NCBI ID: WP_377710550.1
• Uniprot ID: -
• Organism: Pseudomonas oryzihabitans strain CCSM P719
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1327146..1339386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN429_RS06135 (ACN429_06135)	-	1327171..1327887 (-)	717	WP_074584748.1	glycerophosphodiester phosphodiesterase	-
ACN429_RS06140 (ACN429_06140)	-	1327903..1328193 (-)	291	WP_377710544.1	phosphodiesterase	-
ACN429_RS06145 (ACN429_06145)	-	1328190..1328741 (-)	552	WP_058790696.1	PilZ domain-containing protein	-
ACN429_RS06150 (ACN429_06150)	-	1328849..1330099 (+)	1251	WP_027598359.1	lipoprotein-releasing ABC transporter permease subunit	-
ACN429_RS06155 (ACN429_06155)	lolD	1330092..1330793 (+)	702	WP_026083696.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACN429_RS06160 (ACN429_06160)	-	1330801..1332042 (+)	1242	WP_377710548.1	lipoprotein-releasing ABC transporter permease subunit	-
ACN429_RS06165 (ACN429_06165)	comA	1332146..1334386 (+)	2241	WP_377710550.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACN429_RS06170 (ACN429_06170)	exbB	1334578..1335213 (+)	636	WP_007162403.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACN429_RS06175 (ACN429_06175)	-	1335210..1335650 (+)	441	WP_007162404.1	ExbD/TolR family protein	-
ACN429_RS06180 (ACN429_06180)	lpxK	1335647..1336654 (+)	1008	WP_377710553.1	tetraacyldisaccharide 4'-kinase	-
ACN429_RS06185 (ACN429_06185)	-	1336669..1336854 (+)	186	WP_007162406.1	Trm112 family protein	-
ACN429_RS06190 (ACN429_06190)	kdsB	1336851..1337615 (+)	765	WP_144962225.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACN429_RS06195 (ACN429_06195)	-	1337616..1338089 (+)	474	WP_377710556.1	low molecular weight protein-tyrosine-phosphatase	-
ACN429_RS06200 (ACN429_06200)	murB	1338079..1339101 (+)	1023	WP_377710558.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 746 a.a.
• Molecular weight: 79144.80 Da
• Isoelectric Point: 10.3158

>NTDB_id=1105534 ACN429_RS06165 WP_377710550.1 1332146..1334386(+) (comA) [Pseudomonas oryzihabitans strain CCSM P719]
MRAALLSFALGVLLLRAFATLPSLPLLAALAAVALVLLFTRLLALGALGLGLAWALLNGHWALDDRLDPALEQRVLWIDG
QISGLPTVDADSVSFVLAGATSRRAFELPARIRLSWHGGPRPLAGERWRLAAELRGPAGLVNPLGQDREAWLLAQGIGAT
GSVKDGQRLAAASGLATWRDGIRQYLQRRDPAGQGGLLAALVVGDGSGITDAQWQLFQDTGTVHLMVIPGQHIGLIALGV
YAGVVLLARHGFWPRRLPWRLSAAVLTIATALGYGLLAGFEVPVQRACVMVTLGLVWQLGRQQVRLADAVLLALVLVLAA
NPLVSLLPGFWLSFGAVLLLLWSFAGRLGRLPWWLTLGRAQWCMAVGLAPLLLALGLPLSLSGPLANALAVPLMDLAIVP
LALAGTLLSLLWPPLGAPALWLAGGLLQGLLCLLGGLAHLGAAWQPVLAPTWALWLAGLGALLALLPAGVPLRVFGALLM
LPGLFPPPPLPAEGLARITVLDVGQGLAVLVRTRDHALLYDAGPRQGSYDSGARVVLPNLKAFGIGSLDVMLLSHADADH
AGGAPAVARGLPPGQVLSGEAARLKPELHARDCMDGAEWRWNEVAFTTWWHPAADSNASSCVLSVVARGERLLLTGDIDA
RREAELLASGVPVAAEWLIAPHHGSRSGSSAAFIDAVQPRGVLISRGLNNRYGHPHPQVLARYRERGVLPYDTAERGALS
WTLGRWEVPRGQRQVRHWWRIGPPTP

Nucleotide

• Length: 2241 bp

>NTDB_id=1105534 ACN429_RS06165 WP_377710550.1 1332146..1334386(+) (comA) [Pseudomonas oryzihabitans strain CCSM P719]
ATGCGCGCCGCTCTGCTGTCCTTTGCCCTGGGCGTGCTGCTCCTGCGCGCCTTCGCCACGCTGCCGTCGCTACCGCTGCT
GGCGGCCCTCGCGGCCGTGGCCCTGGTGCTGCTGTTCACCCGCCTCCTGGCGCTCGGTGCCCTCGGGCTGGGTCTGGCCT
GGGCGCTGCTCAATGGCCACTGGGCGCTGGACGATCGCCTGGATCCGGCGCTGGAACAGCGGGTGCTGTGGATCGACGGC
CAGATCAGCGGGCTGCCCACGGTGGACGCCGATTCGGTGAGTTTCGTGCTCGCCGGGGCGACCAGCCGCCGCGCGTTTGA
GCTGCCGGCGCGGATCCGCCTGAGCTGGCACGGCGGGCCGCGCCCGCTGGCCGGCGAACGCTGGCGCCTGGCCGCGGAAT
TGCGCGGCCCCGCCGGTCTGGTCAACCCCCTCGGCCAGGATCGCGAAGCCTGGCTGCTGGCCCAAGGCATAGGCGCCACC
GGCAGCGTCAAGGATGGCCAGCGCCTGGCCGCCGCCAGTGGCCTGGCGACCTGGCGCGACGGCATCCGGCAATACCTGCA
GAGGCGCGATCCGGCCGGGCAGGGCGGGCTGCTCGCCGCCCTGGTGGTGGGTGACGGCTCGGGCATCACCGATGCCCAGT
GGCAGCTGTTCCAGGACACCGGCACCGTGCACCTGATGGTCATCCCCGGGCAGCACATCGGCCTGATCGCCCTGGGCGTC
TACGCCGGAGTGGTCCTCCTGGCACGGCATGGCTTCTGGCCGCGCCGGCTGCCCTGGCGCCTGTCCGCGGCGGTGCTGAC
CATCGCCACTGCGCTGGGCTACGGACTGCTGGCCGGCTTCGAGGTGCCGGTGCAGCGGGCCTGCGTCATGGTCACCCTGG
GCCTGGTCTGGCAACTCGGGCGCCAGCAGGTGCGGCTGGCGGATGCCGTGCTGCTGGCCCTGGTGCTGGTGCTGGCCGCC
AATCCGCTGGTCAGTCTGCTGCCTGGATTCTGGCTGTCCTTTGGCGCCGTACTGTTGCTGCTGTGGAGCTTTGCTGGCCG
CCTGGGCCGCCTGCCCTGGTGGCTCACCCTCGGACGCGCCCAGTGGTGCATGGCCGTGGGCCTTGCGCCGCTGCTGCTGG
CGCTGGGCCTGCCCTTGAGTCTGAGCGGCCCGCTGGCCAATGCCCTGGCCGTGCCGCTGATGGACCTGGCCATCGTGCCC
CTGGCCCTGGCGGGGACGCTGCTGTCCCTGCTCTGGCCGCCCCTGGGCGCTCCCGCGTTGTGGCTGGCCGGCGGCCTGCT
GCAGGGCCTGCTCTGCCTGCTGGGCGGCTTGGCGCACCTGGGGGCGGCCTGGCAACCGGTATTGGCACCCACCTGGGCCC
TATGGCTGGCGGGGCTGGGCGCGCTGCTGGCCCTGCTGCCCGCGGGGGTGCCGCTGCGAGTCTTCGGCGCGCTGCTGATG
CTGCCGGGGCTGTTTCCCCCGCCACCGCTACCCGCGGAGGGCCTGGCACGGATCACCGTGCTGGACGTGGGGCAGGGCCT
GGCGGTGCTGGTGCGCACCCGTGACCATGCGCTGCTCTATGATGCCGGTCCGCGCCAGGGCAGCTACGACAGCGGCGCCC
GGGTCGTCCTGCCCAACCTGAAGGCCTTCGGCATCGGCAGCCTGGACGTCATGCTGCTCAGTCACGCCGATGCCGACCAC
GCCGGTGGTGCGCCGGCCGTGGCCAGGGGACTGCCGCCAGGACAGGTGCTCAGTGGCGAGGCGGCTCGCCTCAAGCCGGA
ACTGCACGCCCGGGACTGCATGGATGGGGCCGAGTGGCGCTGGAACGAGGTCGCCTTCACCACCTGGTGGCACCCCGCGG
CGGATTCCAACGCGTCCTCCTGCGTGCTCAGCGTCGTGGCGAGGGGCGAGCGCCTGCTGCTGACCGGCGACATCGACGCC
CGCCGTGAAGCCGAACTGCTGGCCAGCGGTGTGCCCGTGGCGGCGGAATGGCTGATCGCGCCGCACCACGGCAGTCGCAG
CGGCTCCAGCGCCGCCTTCATCGACGCCGTCCAGCCACGTGGTGTGCTCATCTCTCGGGGGCTGAACAATCGCTATGGCC
ATCCCCATCCCCAGGTACTGGCGCGCTATCGCGAGCGCGGCGTGCTGCCCTACGACACCGCCGAGCGGGGCGCCCTGAGC
TGGACCCTGGGTCGCTGGGAGGTACCACGCGGGCAACGCCAGGTGCGGCATTGGTGGCGGATAGGCCCGCCGACACCCTG
A

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-465)

• Metallo-beta-lactamase superfamily (Lactamase_B) (502-681)

• Domain of unknown function (DUF4131) (DUF4131) (24-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	55.756	96.649	0.539