Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACNSPE_RS04785 | Genome accession | NZ_CP183326 |
| Coordinates | 998698..999768 (+) | Length | 356 a.a. |
| NCBI ID | WP_419393697.1 | Uniprot ID | - |
| Organism | Cytobacillus praedii strain MM2025 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 993698..1004768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNSPE_RS04755 (ACNSPE_04755) | - | 993981..994295 (+) | 315 | WP_057765572.1 | MTH1187 family thiamine-binding protein | - |
| ACNSPE_RS04760 (ACNSPE_04760) | - | 994364..994537 (-) | 174 | WP_082631840.1 | DUF2759 domain-containing protein | - |
| ACNSPE_RS04765 (ACNSPE_04765) | - | 994823..995458 (+) | 636 | WP_419393695.1 | MBL fold metallo-hydrolase | - |
| ACNSPE_RS04770 (ACNSPE_04770) | - | 996235..997296 (+) | 1062 | WP_419393696.1 | class I SAM-dependent methyltransferase | - |
| ACNSPE_RS04775 (ACNSPE_04775) | - | 997358..997600 (-) | 243 | WP_053477001.1 | DUF2626 domain-containing protein | - |
| ACNSPE_RS04780 (ACNSPE_04780) | - | 997684..998385 (-) | 702 | WP_057765578.1 | helix-turn-helix transcriptional regulator | - |
| ACNSPE_RS04785 (ACNSPE_04785) | comGA | 998698..999768 (+) | 1071 | WP_419393697.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACNSPE_RS04790 (ACNSPE_04790) | comGB | 999755..1000786 (+) | 1032 | WP_419393698.1 | competence type IV pilus assembly protein ComGB | - |
| ACNSPE_RS04795 (ACNSPE_04795) | comGC | 1000786..1001115 (+) | 330 | WP_057765584.1 | competence type IV pilus major pilin ComGC | - |
| ACNSPE_RS04800 (ACNSPE_04800) | comGD | 1001112..1001552 (+) | 441 | WP_057765586.1 | competence type IV pilus minor pilin ComGD | - |
| ACNSPE_RS04805 (ACNSPE_04805) | - | 1001536..1001868 (+) | 333 | WP_131237559.1 | phosphatase | - |
| ACNSPE_RS04810 (ACNSPE_04810) | comGF | 1001822..1002304 (+) | 483 | WP_419393699.1 | competence type IV pilus minor pilin ComGF | - |
| ACNSPE_RS04815 (ACNSPE_04815) | comGG | 1002291..1002674 (+) | 384 | WP_165571560.1 | competence type IV pilus minor pilin ComGG | - |
| ACNSPE_RS04820 (ACNSPE_04820) | - | 1002689..1003192 (+) | 504 | WP_057765594.1 | shikimate kinase | - |
| ACNSPE_RS04825 (ACNSPE_04825) | - | 1003261..1003440 (+) | 180 | WP_057765596.1 | YqzE family protein | - |
| ACNSPE_RS04830 (ACNSPE_04830) | - | 1003474..1004286 (-) | 813 | WP_419393700.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40216.53 Da Isoelectric Point: 8.6625
>NTDB_id=1105284 ACNSPE_RS04785 WP_419393697.1 998698..999768(+) (comGA) [Cytobacillus praedii strain MM2025]
MNTIEKLAERIIKDAVRNHASDIHIVPRRNDTLIQLRLANKLIPRLYLPKEECDRLISHFKFTASMDIGEKRRPQSGAYS
YQIDGQMIGFRFSTLPSSHNESLVIRILPQQEQIPFYQISLFPNMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNE
TSHMFNRNVITLEDPIEKENDMVLQVQVNEKAGVSYATGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMH
TRDAKGAIYRLSEFGVDAVEIEQTLVAVAAQRLVELSCPFCKGECSPYCYCYGRLKRASVFELLTGRALNASMKAARGEE
AEIKYRNLKDIIKKGIALGFIKDTEYERWVLEHDQS
MNTIEKLAERIIKDAVRNHASDIHIVPRRNDTLIQLRLANKLIPRLYLPKEECDRLISHFKFTASMDIGEKRRPQSGAYS
YQIDGQMIGFRFSTLPSSHNESLVIRILPQQEQIPFYQISLFPNMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNE
TSHMFNRNVITLEDPIEKENDMVLQVQVNEKAGVSYATGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMH
TRDAKGAIYRLSEFGVDAVEIEQTLVAVAAQRLVELSCPFCKGECSPYCYCYGRLKRASVFELLTGRALNASMKAARGEE
AEIKYRNLKDIIKKGIALGFIKDTEYERWVLEHDQS
Nucleotide
Download Length: 1071 bp
>NTDB_id=1105284 ACNSPE_RS04785 WP_419393697.1 998698..999768(+) (comGA) [Cytobacillus praedii strain MM2025]
TTGAACACAATTGAAAAACTTGCAGAAAGAATCATTAAAGATGCTGTCAGAAATCATGCTTCAGATATCCACATTGTTCC
CCGCAGAAATGATACTCTCATCCAATTACGTCTTGCTAACAAACTGATCCCTAGACTGTATTTACCGAAAGAAGAATGCG
ACAGACTGATTTCACATTTTAAGTTTACGGCTTCTATGGATATCGGAGAAAAGAGAAGGCCGCAAAGTGGTGCATACTCC
TACCAGATTGATGGTCAAATGATTGGCTTTCGTTTTTCAACCCTCCCCTCCAGCCATAATGAAAGTTTAGTTATTCGAAT
CCTCCCTCAGCAAGAACAAATCCCTTTCTACCAAATTTCTTTATTCCCGAATATGACCCGGAAACTACTTGCCTTATTAA
AGCATGCCCACGGATTAATTATTTTTACTGGCCCGACTGGATCAGGAAAAACAACCACCCTCTACTCACTTCTAAATGAA
ACCTCCCATATGTTCAATCGCAATGTGATCACTCTTGAAGACCCAATCGAAAAAGAAAATGATATGGTGCTCCAGGTTCA
AGTAAATGAAAAAGCTGGTGTATCTTATGCAACTGGATTAAAAGCCATTCTTCGACATGACCCAGATATCATTATGGTTG
GGGAAATCAGGGATGCAGAAACAGCAAAGATCGCAGTAAGAGCAGCGCTTACAGGTCATTTAGTTTTGAGTACGATGCAT
ACGAGGGATGCAAAAGGAGCGATATACAGGTTAAGTGAATTTGGTGTAGATGCAGTAGAGATAGAGCAGACCCTTGTTGC
TGTAGCCGCGCAGAGACTTGTGGAATTATCCTGTCCGTTTTGTAAGGGTGAATGTTCGCCATACTGTTATTGCTATGGCA
GATTGAAAAGAGCAAGTGTTTTCGAACTTTTAACGGGGAGGGCATTGAATGCCTCTATGAAAGCAGCGAGGGGAGAAGAG
GCTGAAATTAAATATCGAAACTTAAAGGATATCATAAAAAAGGGAATAGCTCTTGGTTTTATTAAAGATACAGAATATGA
GCGGTGGGTGCTTGAACATGATCAATCGTAA
TTGAACACAATTGAAAAACTTGCAGAAAGAATCATTAAAGATGCTGTCAGAAATCATGCTTCAGATATCCACATTGTTCC
CCGCAGAAATGATACTCTCATCCAATTACGTCTTGCTAACAAACTGATCCCTAGACTGTATTTACCGAAAGAAGAATGCG
ACAGACTGATTTCACATTTTAAGTTTACGGCTTCTATGGATATCGGAGAAAAGAGAAGGCCGCAAAGTGGTGCATACTCC
TACCAGATTGATGGTCAAATGATTGGCTTTCGTTTTTCAACCCTCCCCTCCAGCCATAATGAAAGTTTAGTTATTCGAAT
CCTCCCTCAGCAAGAACAAATCCCTTTCTACCAAATTTCTTTATTCCCGAATATGACCCGGAAACTACTTGCCTTATTAA
AGCATGCCCACGGATTAATTATTTTTACTGGCCCGACTGGATCAGGAAAAACAACCACCCTCTACTCACTTCTAAATGAA
ACCTCCCATATGTTCAATCGCAATGTGATCACTCTTGAAGACCCAATCGAAAAAGAAAATGATATGGTGCTCCAGGTTCA
AGTAAATGAAAAAGCTGGTGTATCTTATGCAACTGGATTAAAAGCCATTCTTCGACATGACCCAGATATCATTATGGTTG
GGGAAATCAGGGATGCAGAAACAGCAAAGATCGCAGTAAGAGCAGCGCTTACAGGTCATTTAGTTTTGAGTACGATGCAT
ACGAGGGATGCAAAAGGAGCGATATACAGGTTAAGTGAATTTGGTGTAGATGCAGTAGAGATAGAGCAGACCCTTGTTGC
TGTAGCCGCGCAGAGACTTGTGGAATTATCCTGTCCGTTTTGTAAGGGTGAATGTTCGCCATACTGTTATTGCTATGGCA
GATTGAAAAGAGCAAGTGTTTTCGAACTTTTAACGGGGAGGGCATTGAATGCCTCTATGAAAGCAGCGAGGGGAGAAGAG
GCTGAAATTAAATATCGAAACTTAAAGGATATCATAAAAAAGGGAATAGCTCTTGGTTTTATTAAAGATACAGAATATGA
GCGGTGGGTGCTTGAACATGATCAATCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.695 |
98.596 |
0.559 |
| pilB | Glaesserella parasuis strain SC1401 |
39.773 |
98.876 |
0.393 |
| pilB | Haemophilus influenzae 86-028NP |
37.356 |
97.753 |
0.365 |