Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACAK36_RS10370 | Genome accession | NZ_AP031585 |
| Coordinates | 2119972..2120445 (-) | Length | 157 a.a. |
| NCBI ID | WP_049581046.1 | Uniprot ID | A0A7X5LTR4 |
| Organism | Acinetobacter baumannii strain JUNP543 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2114972..2125445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK36_RS10355 (JUNP543_2073) | pilX | 2117601..2118419 (-) | 819 | WP_049581040.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ACAK36_RS10360 (JUNP543_2074) | pilW | 2118416..2119417 (-) | 1002 | WP_049581042.1 | PilW family protein | Machinery gene |
| ACAK36_RS10365 (JUNP543_2075) | pilV | 2119418..2119978 (-) | 561 | WP_087486632.1 | type IV pilus modification protein PilV | Machinery gene |
| ACAK36_RS10370 (JUNP543_2076) | fimU | 2119972..2120445 (-) | 474 | WP_049581046.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACAK36_RS10375 (JUNP543_2077) | ispH | 2120615..2121565 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACAK36_RS10380 (JUNP543_2078) | gmk | 2121688..2122317 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACAK36_RS10385 (JUNP543_2079) | rpoZ | 2122390..2122668 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACAK36_RS10390 | - | 2122707..2122837 (+) | 131 | Protein_2039 | hypothetical protein | - |
| ACAK36_RS10395 (JUNP543_2080) | - | 2122877..2124982 (+) | 2106 | WP_163073604.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16825.38 Da Isoelectric Point: 8.5355
>NTDB_id=110453 ACAK36_RS10370 WP_049581046.1 2119972..2120445(-) (fimU) [Acinetobacter baumannii strain JUNP543]
MRGITPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGITPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=110453 ACAK36_RS10370 WP_049581046.1 2119972..2120445(-) (fimU) [Acinetobacter baumannii strain JUNP543]
ATGAGGGGAATTACTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCATT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCTGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTACTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCATT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCTGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |