Detailed information NTG1104463

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACNT2N_RS25280
• Genome accession: NZ_CP183197
• Coordinates: 5744217..5746463 (-)
• Length: 748 a.a.
• NCBI ID: WP_208665481.1
• Uniprot ID: A0A2Z4ZYF1
• Organism: Pseudomonas thivervalensis strain NFX106
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5739217..5751463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNT2N_RS25245 (ACNT2N_25245)	murB	5739602..5740621 (-)	1020	WP_208665478.1	UDP-N-acetylmuramate dehydrogenase	-
ACNT2N_RS25250 (ACNT2N_25250)	-	5740618..5741082 (-)	465	WP_053123844.1	low molecular weight protein-tyrosine-phosphatase	-
ACNT2N_RS25255 (ACNT2N_25255)	kdsB	5741082..5741846 (-)	765	WP_208665479.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACNT2N_RS25260 (ACNT2N_25260)	-	5741843..5742028 (-)	186	WP_003179363.1	Trm112 family protein	-
ACNT2N_RS25265 (ACNT2N_25265)	lpxK	5742051..5743061 (-)	1011	WP_208665480.1	tetraacyldisaccharide 4'-kinase	-
ACNT2N_RS25270 (ACNT2N_25270)	-	5743061..5743489 (-)	429	WP_053123850.1	ExbD/TolR family protein	-
ACNT2N_RS25275 (ACNT2N_25275)	exbB	5743486..5744121 (-)	636	WP_167352836.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACNT2N_RS25280 (ACNT2N_25280)	comA	5744217..5746463 (-)	2247	WP_208665481.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACNT2N_RS25285 (ACNT2N_25285)	-	5746608..5747123 (+)	516	WP_046063671.1	DUF2062 domain-containing protein	-
ACNT2N_RS25290 (ACNT2N_25290)	-	5747289..5748068 (-)	780	WP_053124195.1	ABC transporter permease	-
ACNT2N_RS25295 (ACNT2N_25295)	-	5748071..5749003 (-)	933	WP_053123854.1	ABC transporter ATP-binding protein	-
ACNT2N_RS25300 (ACNT2N_25300)	-	5749139..5749762 (-)	624	WP_208665482.1	glutathione S-transferase family protein	-
ACNT2N_RS25305 (ACNT2N_25305)	-	5749807..5750466 (-)	660	WP_208665483.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 80938.29 Da
• Isoelectric Point: 10.0343

>NTDB_id=1104463 ACNT2N_RS25280 WP_208665481.1 5744217..5746463(-) (comA) [Pseudomonas thivervalensis strain NFX106]
MRTGLVALALGLVAPIFLSALPPLWLVAAMPVLALMVLPFRTYPLGFFLFGLAWACLSAQWALDNRLPIALDGETRWIEG
RVVGLPQQGDGVVRFELVDAHSRRTRLPMTMRLAWFGGPPINSGERWRLAVKLKRPAGLLNPHGFDYAAWLLSRGIGATG
TVKDGRLLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARHGLWPAGLAWLPWACALAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQADPWWAWLLAFAGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVAVGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPIPLIGEGLLWIAGGLLDLLFKGLALVAGRMPAWVPVAVPPWALGIAALGAFLLLLPKGVPLRVLGWPMVLLMV
FPPRENLPPGHAEVWQLDVGQGLAVLVRTRHHTLLYDAGPRFGEADVGERVVLPTLRKLGVHGLDLMLLSHADADHAGGA
QAVRKGLPTREVISGDPDALPAELLAGPCDSGRRWEWDGVGFELWRWTSAVDSNQTSCVLLVEAGGERLLLTGDIDTRAE
RALLDGPLALPIQWLAAPHHGSRSSSSMALLSRLKPHSVLISRGQGNAFGHPHPQVMARYRRLGLAIYDSAEQGAIRLLL
GAFELPRTEAGHRRYWRDPLAVGPPGQH

Nucleotide

• Length: 2247 bp

>NTDB_id=1104463 ACNT2N_RS25280 WP_208665481.1 5744217..5746463(-) (comA) [Pseudomonas thivervalensis strain NFX106]
ATGCGCACAGGGTTAGTTGCGCTTGCACTGGGGCTGGTGGCCCCGATTTTCTTATCGGCACTGCCGCCGTTGTGGCTGGT
TGCAGCCATGCCGGTGCTGGCGCTGATGGTGTTGCCGTTTCGCACCTACCCGCTGGGCTTCTTCCTGTTCGGGCTGGCCT
GGGCGTGCCTGTCGGCGCAGTGGGCGCTGGACAATCGATTACCCATCGCCCTGGACGGAGAAACCCGCTGGATCGAAGGG
CGCGTCGTCGGTCTGCCGCAACAGGGCGACGGCGTGGTGCGCTTCGAACTGGTTGATGCCCATTCACGTCGTACCCGATT
GCCGATGACGATGCGCCTCGCCTGGTTCGGTGGCCCGCCCATCAACAGCGGCGAACGCTGGCGATTGGCAGTGAAGCTCA
AGCGGCCCGCCGGGTTGCTGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGTTGAGCCGCGGCATTGGCGCGACCGGT
ACCGTCAAGGACGGGCGTCTCCTGCAAGCGGCCCGGGGCGCCTGGCGTGATGAGGTGCGCCAGGCGCTGGCACAGGTCGA
CGCCCATGGCCGCTCCGGTGCGTTGGCGGCATTGGTCCTGGGCGACGGCGGCGGGCTGAGTCGCGAGGACTGGCAGGTTT
TGCAGGACACCGGCACCGTCCATTTGCTGGTGATTTCCGGCCAACATATCGGCCTGCTTGCCGGCCTGGTGTACCTGCTG
GTGGCTGGCGCGGCGCGTCATGGCCTGTGGCCGGCGGGGCTGGCGTGGTTGCCTTGGGCCTGTGCACTGGCCTTTTGCGC
GGCCCTGGGCTATGGCTTGCTCGCCGGGTTCGAGGTGCCGGTGCGACGAGCCTGCGCGATGATCGGCCTGGTGTTGCTGT
GGCGCTTGCGCTTCAAACAGGCTGACCCCTGGTGGGCCTGGCTGCTGGCTTTCGCCGGGGTGCTGGTGTTCGATCCGCTC
GCCAGCCTGCGGCCGGGGTTCTGGTTGTCATTCGCGGCGGTTGCCATATTGATGTTCACCTTTGGCGCTCGCCTGGGACC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTGGCGGTCGGCCTGTGTCCGTTGCTGTTGATCGTGGGCT
TGCCGGTCAGTCTCAGCGGGCCGCTGGTGAACCTGCTTGCGGTGCCTTGGATCAGCCTGCTGGTGTTGCCGCCAGCGCTG
CTCGGCACGGCATTGTTACCGATACCGCTCATCGGTGAAGGCCTGTTGTGGATCGCCGGTGGGTTGCTCGATCTGCTGTT
CAAGGGGCTGGCGCTGGTGGCCGGGCGAATGCCCGCCTGGGTGCCTGTTGCGGTCCCGCCCTGGGCCTTGGGCATCGCAG
CCCTGGGGGCTTTTTTGCTGCTACTGCCCAAAGGCGTGCCGCTGCGTGTGCTGGGGTGGCCGATGGTCTTGCTGATGGTG
TTCCCGCCGCGAGAGAACCTGCCGCCAGGGCACGCCGAGGTCTGGCAACTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGCACCCGGCATCACACCTTGCTTTATGACGCCGGGCCGCGCTTTGGCGAGGCCGATGTGGGTGAACGCGTGGTGCTGC
CGACCTTGCGCAAGCTCGGTGTGCACGGCTTGGACCTGATGCTCCTCAGCCATGCCGACGCCGATCATGCCGGCGGCGCC
CAAGCCGTGCGCAAGGGACTGCCGACGAGGGAGGTGATCAGTGGCGATCCCGACGCGCTGCCCGCCGAGTTGTTGGCCGG
GCCTTGCGACAGCGGCAGGCGCTGGGAATGGGACGGGGTCGGGTTCGAGCTGTGGCGGTGGACGTCTGCCGTCGACAGCA
ACCAGACGTCCTGCGTCTTGCTGGTGGAGGCCGGTGGCGAGCGTCTGCTGCTGACCGGCGATATCGACACCCGCGCCGAA
CGCGCCTTGCTCGACGGGCCCCTGGCGCTGCCGATCCAGTGGCTGGCGGCGCCTCATCACGGCAGCCGCAGCTCGTCGTC
GATGGCGCTGCTGTCGCGCCTCAAGCCGCATTCGGTGTTGATCTCCCGAGGGCAGGGCAACGCGTTCGGTCATCCCCATC
CCCAAGTGATGGCCCGCTACCGCCGCTTGGGCCTGGCGATCTACGACAGCGCCGAGCAGGGCGCCATTCGTCTGCTACTG
GGTGCTTTCGAGTTGCCGCGCACCGAGGCCGGGCACCGACGCTACTGGCGCGATCCGCTCGCCGTCGGGCCGCCGGGGCA
ACATTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (22-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

• Competence protein (Competence) (198-464)

3D structure

• AlphaFold DB: A0A2Z4ZYF1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.173	95.722	0.586