Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACAK38_RS10700 | Genome accession | NZ_AP031583 |
| Coordinates | 2211249..2211629 (-) | Length | 126 a.a. |
| NCBI ID | WP_045544207.1 | Uniprot ID | A0A1Y1P0I7 |
| Organism | Acinetobacter baumannii strain JUNP514 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2206249..2216629
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK38_RS10670 (JUNP514_2131) | tadA | 2206368..2206871 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ACAK38_RS10675 (JUNP514_2132) | - | 2206878..2208002 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACAK38_RS10680 (JUNP514_2133) | ung | 2207999..2208712 (-) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| ACAK38_RS10685 (JUNP514_2134) | - | 2208763..2209359 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ACAK38_RS10690 (JUNP514_2135) | gspK | 2209589..2210548 (-) | 960 | WP_045544206.1 | type II secretion system minor pseudopilin GspK | - |
| ACAK38_RS10695 (JUNP514_2136) | xcpW | 2210548..2211249 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACAK38_RS10700 (JUNP514_2137) | xcpV | 2211249..2211629 (-) | 381 | WP_045544207.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACAK38_RS10705 (JUNP514_2138) | - | 2211619..2212173 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACAK38_RS10710 (JUNP514_2139) | - | 2212183..2212791 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACAK38_RS10715 (JUNP514_2140) | - | 2212829..2213602 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACAK38_RS10720 (JUNP514_2141) | - | 2213620..2213961 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACAK38_RS10725 (JUNP514_2142) | - | 2213973..2214953 (-) | 981 | WP_045544208.1 | DNA polymerase III subunit delta' | - |
| ACAK38_RS10730 (JUNP514_2143) | kdsB | 2214965..2215726 (-) | 762 | WP_045544209.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14035.30 Da Isoelectric Point: 9.8004
>NTDB_id=110413 ACAK38_RS10700 WP_045544207.1 2211249..2211629(-) (xcpV) [Acinetobacter baumannii strain JUNP514]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTFQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTFQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=110413 ACAK38_RS10700 WP_045544207.1 2211249..2211629(-) (xcpV) [Acinetobacter baumannii strain JUNP514]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTTCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTTCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |