Detailed information NTG0110412

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK38_RS10695
• Genome accession: NZ_AP031583
• Coordinates: 2210548..2211249 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain JUNP514
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2205548..2216249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK38_RS10665 (JUNP514_2130)	-	2205855..2206298 (-)	444	WP_045544205.1	SRPBCC family protein	-
ACAK38_RS10670 (JUNP514_2131)	tadA	2206368..2206871 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
ACAK38_RS10675 (JUNP514_2132)	-	2206878..2208002 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK38_RS10680 (JUNP514_2133)	ung	2207999..2208712 (-)	714	WP_001177530.1	uracil-DNA glycosylase	-
ACAK38_RS10685 (JUNP514_2134)	-	2208763..2209359 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
ACAK38_RS10690 (JUNP514_2135)	gspK	2209589..2210548 (-)	960	WP_045544206.1	type II secretion system minor pseudopilin GspK	-
ACAK38_RS10695 (JUNP514_2136)	xcpW	2210548..2211249 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK38_RS10700 (JUNP514_2137)	xcpV	2211249..2211629 (-)	381	WP_045544207.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK38_RS10705 (JUNP514_2138)	-	2211619..2212173 (-)	555	WP_000841373.1	type II secretion system protein	-
ACAK38_RS10710 (JUNP514_2139)	-	2212183..2212791 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK38_RS10715 (JUNP514_2140)	-	2212829..2213602 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACAK38_RS10720 (JUNP514_2141)	-	2213620..2213961 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACAK38_RS10725 (JUNP514_2142)	-	2213973..2214953 (-)	981	WP_045544208.1	DNA polymerase III subunit delta'	-
ACAK38_RS10730 (JUNP514_2143)	kdsB	2214965..2215726 (-)	762	WP_045544209.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=110412 ACAK38_RS10695 WP_000594572.1 2210548..2211249(-) (xcpW) [Acinetobacter baumannii strain JUNP514]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110412 ACAK38_RS10695 WP_000594572.1 2210548..2211249(-) (xcpW) [Acinetobacter baumannii strain JUNP514]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991