Detailed information NTG1103898

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACNOHD_RS07945
• Genome accession: NZ_CP183060
• Coordinates: 1710170..1712395 (+)
• Length: 741 a.a.
• NCBI ID: WP_418644009.1
• Uniprot ID: -
• Organism: Stutzerimonas kunmingensis strain L4
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1705170..1717395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNOHD_RS07915 (ACNOHD_07915)	-	1705316..1705624 (-)	309	WP_023446735.1	hypothetical protein	-
ACNOHD_RS07920 (ACNOHD_07920)	-	1705628..1706263 (-)	636	WP_286775463.1	PilZ domain-containing protein	-
ACNOHD_RS07925 (ACNOHD_07925)	-	1706300..1707547 (+)	1248	WP_313239510.1	lipoprotein-releasing ABC transporter permease subunit	-
ACNOHD_RS07930 (ACNOHD_07930)	lolD	1707555..1708253 (+)	699	WP_003299646.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACNOHD_RS07935 (ACNOHD_07935)	-	1708253..1709497 (+)	1245	WP_418644008.1	lipoprotein-releasing ABC transporter permease subunit	-
ACNOHD_RS07940 (ACNOHD_07940)	-	1709504..1710019 (-)	516	WP_003299644.1	DUF2062 domain-containing protein	-
ACNOHD_RS07945 (ACNOHD_07945)	comA	1710170..1712395 (+)	2226	WP_418644009.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACNOHD_RS07950 (ACNOHD_07950)	-	1712467..1713099 (+)	633	WP_031298327.1	MotA/TolQ/ExbB proton channel family protein	-
ACNOHD_RS07955 (ACNOHD_07955)	-	1713096..1713524 (+)	429	WP_014820907.1	ExbD/TolR family protein	-
ACNOHD_RS07960 (ACNOHD_07960)	lpxK	1713524..1714528 (+)	1005	WP_418644010.1	tetraacyldisaccharide 4'-kinase	-
ACNOHD_RS07965 (ACNOHD_07965)	-	1714574..1714759 (+)	186	WP_003299639.1	Trm112 family protein	-
ACNOHD_RS07970 (ACNOHD_07970)	kdsB	1714756..1715520 (+)	765	WP_044316182.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACNOHD_RS07975 (ACNOHD_07975)	-	1715522..1715986 (+)	465	WP_023446727.1	low molecular weight protein-tyrosine-phosphatase	-
ACNOHD_RS07980 (ACNOHD_07980)	murB	1715983..1717002 (+)	1020	WP_023446726.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80982.40 Da
• Isoelectric Point: 9.8727

>NTDB_id=1103898 ACNOHD_RS07945 WP_418644009.1 1710170..1712395(+) (comA) [Stutzerimonas kunmingensis strain L4]
MRTWMLALAAGLVLPRFLPALPSFWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPSSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGTSLALLFELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVARTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGQDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=1103898 ACNOHD_RS07945 WP_418644009.1 1710170..1712395(+) (comA) [Stutzerimonas kunmingensis strain L4]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTTTCTGGATTTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCCGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCAGCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCTGG
GCTGCCGTCAAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGCTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCTCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCCGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTCGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTCTCGTTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCCCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCACCTCGCTGGCGCT
GCTGTTCGAGCTGCTGTCCGCCATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCCCCGTATTCCGAAGTAGCCGAAGGACGGGCGCAGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGACAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCCGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTGAA
TGCCAAGCCCTGTGAAAACGGTGCCGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTGCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCGTTGCTGCTCAGCGGACAGGATGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAGCCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAATCGACGTTTACGACACCGCCTTGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.62	97.436	0.649
comA	Ralstonia pseudosolanacearum GMI1000	36.494	100	0.379