Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACAK30_RS17310 | Genome accession | NZ_AP031579 |
| Coordinates | 3617819..3618292 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214067.1 | Uniprot ID | A0A7U3Y304 |
| Organism | Acinetobacter baumannii strain JUNP406 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3612819..3623292
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK30_RS17295 (JUNP406_3446) | pilX | 3615448..3616266 (-) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ACAK30_RS17300 (JUNP406_3447) | pilW | 3616263..3617264 (-) | 1002 | WP_000079192.1 | PilW family protein | Machinery gene |
| ACAK30_RS17305 (JUNP406_3448) | pilV | 3617265..3617825 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACAK30_RS17310 (JUNP406_3449) | fimU | 3617819..3618292 (-) | 474 | WP_001214067.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACAK30_RS17315 (JUNP406_3450) | ispH | 3618462..3619412 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACAK30_RS17320 (JUNP406_3451) | gmk | 3619535..3620164 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACAK30_RS17325 (JUNP406_3452) | rpoZ | 3620237..3620515 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACAK30_RS17330 | - | 3620554..3620684 (+) | 131 | Protein_3378 | hypothetical protein | - |
| ACAK30_RS17335 (JUNP406_3453) | - | 3620724..3622829 (+) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16823.40 Da Isoelectric Point: 8.5355
>NTDB_id=110239 ACAK30_RS17310 WP_001214067.1 3617819..3618292(-) (fimU) [Acinetobacter baumannii strain JUNP406]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=110239 ACAK30_RS17310 WP_001214067.1 3617819..3618292(-) (fimU) [Acinetobacter baumannii strain JUNP406]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |