Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACAK29_RS09015 | Genome accession | NZ_AP031578 |
| Coordinates | 1899973..1900353 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain JUNP405 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1894973..1905353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK29_RS08985 (JUNP405_1798) | kdsB | 1895876..1896637 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACAK29_RS08990 (JUNP405_1799) | - | 1896649..1897629 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACAK29_RS08995 (JUNP405_1800) | - | 1897641..1897982 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACAK29_RS09000 (JUNP405_1801) | - | 1898000..1898773 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACAK29_RS09005 (JUNP405_1802) | - | 1898811..1899419 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACAK29_RS09010 (JUNP405_1803) | - | 1899429..1899983 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACAK29_RS09015 (JUNP405_1804) | xcpV | 1899973..1900353 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACAK29_RS09020 (JUNP405_1805) | xcpW | 1900353..1901054 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACAK29_RS09025 (JUNP405_1806) | gspK | 1901054..1902013 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACAK29_RS09030 (JUNP405_1807) | - | 1902244..1902840 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ACAK29_RS09035 (JUNP405_1808) | ung | 1902891..1903604 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACAK29_RS09040 (JUNP405_1809) | - | 1903601..1904725 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACAK29_RS09045 (JUNP405_1810) | tadA | 1904732..1905235 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=110177 ACAK29_RS09015 WP_000836911.1 1899973..1900353(+) (xcpV) [Acinetobacter baumannii strain JUNP405]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=110177 ACAK29_RS09015 WP_000836911.1 1899973..1900353(+) (xcpV) [Acinetobacter baumannii strain JUNP405]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |