Detailed information NTG0110178

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK29_RS09020
• Genome accession: NZ_AP031578
• Coordinates: 1900353..1901054 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain JUNP405
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1895353..1906054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK29_RS08985 (JUNP405_1798)	kdsB	1895876..1896637 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACAK29_RS08990 (JUNP405_1799)	-	1896649..1897629 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACAK29_RS08995 (JUNP405_1800)	-	1897641..1897982 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACAK29_RS09000 (JUNP405_1801)	-	1898000..1898773 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACAK29_RS09005 (JUNP405_1802)	-	1898811..1899419 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK29_RS09010 (JUNP405_1803)	-	1899429..1899983 (+)	555	WP_000841373.1	type II secretion system protein	-
ACAK29_RS09015 (JUNP405_1804)	xcpV	1899973..1900353 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK29_RS09020 (JUNP405_1805)	xcpW	1900353..1901054 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK29_RS09025 (JUNP405_1806)	gspK	1901054..1902013 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACAK29_RS09030 (JUNP405_1807)	-	1902244..1902840 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACAK29_RS09035 (JUNP405_1808)	ung	1902891..1903604 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACAK29_RS09040 (JUNP405_1809)	-	1903601..1904725 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK29_RS09045 (JUNP405_1810)	tadA	1904732..1905235 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACAK29_RS09050 (JUNP405_1811)	-	1905305..1905748 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=110178 ACAK29_RS09020 WP_000594589.1 1900353..1901054(+) (xcpW) [Acinetobacter baumannii strain JUNP405]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110178 ACAK29_RS09020 WP_000594589.1 1900353..1901054(+) (xcpW) [Acinetobacter baumannii strain JUNP405]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996