Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACNFKH_RS05080 | Genome accession | NZ_CP182513 |
| Coordinates | 973385..973687 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain AS-83-79 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 968385..978687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNFKH_RS05055 | rpsR | 968747..969007 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACNFKH_RS05060 | lon | 969068..971443 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| ACNFKH_RS05065 | bamD | 971460..972107 (-) | 648 | WP_002882608.1 | outer membrane protein assembly factor BamD | - |
| ACNFKH_RS05070 | fliW | 972268..972657 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACNFKH_RS05075 | proC | 972657..973388 (+) | 732 | WP_002882606.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACNFKH_RS05080 | ctsT | 973385..973687 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| ACNFKH_RS05085 | - | 973684..974346 (+) | 663 | WP_002882605.1 | hypothetical protein | - |
| ACNFKH_RS05090 | - | 974343..974795 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACNFKH_RS05095 | hemD | 974792..975421 (-) | 630 | WP_002882604.1 | uroporphyrinogen-III synthase | - |
| ACNFKH_RS05100 | thiE | 975399..976031 (-) | 633 | WP_002882603.1 | thiamine phosphate synthase | - |
| ACNFKH_RS05105 | thiD | 976021..976833 (-) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACNFKH_RS05110 | - | 976830..977516 (-) | 687 | WP_002882601.1 | endonuclease III domain-containing protein | - |
| ACNFKH_RS05115 | - | 977513..978274 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=1101760 ACNFKH_RS05080 WP_002855822.1 973385..973687(+) (ctsT) [Campylobacter jejuni strain AS-83-79]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1101760 ACNFKH_RS05080 WP_002855822.1 973385..973687(+) (ctsT) [Campylobacter jejuni strain AS-83-79]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |