Detailed information NTG1101154

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACNVPQ_RS17300
• Genome accession: NZ_CP182318
• Coordinates: 3486912..3488075 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain Scm3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3481912..3493075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNVPQ_RS17270	-	3482176..3482595 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
ACNVPQ_RS17275	comFC	3482669..3483358 (-)	690	WP_198161198.1	phosphoribosyltransferase family protein	Machinery gene
ACNVPQ_RS17280	-	3483364..3483648 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
ACNVPQ_RS17285	comFA	3483706..3485091 (-)	1386	WP_099320008.1	DEAD/DEAH box helicase	Machinery gene
ACNVPQ_RS17290	-	3485200..3486048 (-)	849	WP_094031329.1	DegV family protein	-
ACNVPQ_RS17295	degU	3486146..3486835 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACNVPQ_RS17300	degS	3486912..3488075 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ACNVPQ_RS17305	-	3488298..3488945 (+)	648	WP_007407485.1	YigZ family protein	-
ACNVPQ_RS17310	-	3488950..3490170 (+)	1221	WP_012118574.1	LCP family protein	-
ACNVPQ_RS17315	-	3490269..3491345 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACNVPQ_RS17320	tuaH	3491478..3492674 (-)	1197	WP_094031330.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1101154 ACNVPQ_RS17300 WP_007407484.1 3486912..3488075(-) (degS) [Bacillus velezensis strain Scm3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1101154 ACNVPQ_RS17300 WP_007407484.1 3486912..3488075(-) (degS) [Bacillus velezensis strain Scm3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951