Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACNI65_RS01565 Genome accession   NZ_CP182288
Coordinates   352603..352998 (+) Length   131 a.a.
NCBI ID   WP_343636321.1    Uniprot ID   -
Organism   Roseateles sp. So40a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 347603..357998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNI65_RS01545 (ACNI65_01545) mpl 348320..349684 (-) 1365 WP_416760791.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase -
  ACNI65_RS01550 (ACNI65_01550) hemL 349818..351104 (-) 1287 WP_416760792.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACNI65_RS01555 (ACNI65_01555) thiD 351179..352147 (-) 969 WP_416760793.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ACNI65_RS01560 (ACNI65_01560) - 352281..352472 (+) 192 WP_416760794.1 rubredoxin -
  ACNI65_RS01565 (ACNI65_01565) pilG 352603..352998 (+) 396 WP_343636321.1 response regulator Regulator
  ACNI65_RS01570 (ACNI65_01570) - 353125..353490 (+) 366 WP_088406380.1 response regulator transcription factor -
  ACNI65_RS01575 (ACNI65_01575) - 353495..354013 (+) 519 WP_416760795.1 chemotaxis protein CheW -
  ACNI65_RS01580 (ACNI65_01580) - 354075..356339 (+) 2265 WP_416760796.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14603.71 Da        Isoelectric Point: 7.1340

>NTDB_id=1100987 ACNI65_RS01565 WP_343636321.1 352603..352998(+) (pilG) [Roseateles sp. So40a]
MDSSASPRTATKVLVIDDSNTIRRSAEIFLKQGGHEVVLAEDGFDALAKLSDYQPDLVFCDILMPRLDGYQTCAIIKRNP
QFASVPVIMLSSKDGLFDKARGRMVGSQDYLTKPFTKDQLLQAVQQHRREG

Nucleotide


Download         Length: 396 bp        

>NTDB_id=1100987 ACNI65_RS01565 WP_343636321.1 352603..352998(+) (pilG) [Roseateles sp. So40a]
TTGGATTCCAGCGCAAGCCCCCGCACGGCGACCAAGGTGCTCGTCATCGATGACAGCAACACGATCCGCCGCAGCGCCGA
GATCTTCCTGAAGCAGGGCGGCCATGAGGTCGTGCTGGCCGAGGACGGCTTCGATGCGCTGGCCAAGCTCAGCGACTACC
AGCCCGACCTGGTGTTCTGCGACATCCTGATGCCCCGTCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAATCCG
CAGTTCGCGTCGGTGCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCCGCGGCCGGATGGTCGGCTC
CCAGGATTACCTGACCAAGCCGTTCACGAAGGACCAGCTGCTGCAGGCCGTCCAGCAGCACCGCCGGGAGGGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(13-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.793

88.55

0.565
  pilH Synechocystis sp. PCC 6803

42.735

89.313

0.382

Multiple sequence alignment