Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ABXS94_RS12710 | Genome accession | NZ_AP031566 |
| Coordinates | 2643644..2644279 (-) | Length | 211 a.a. |
| NCBI ID | WP_004974461.1 | Uniprot ID | A0AAP4M279 |
| Organism | Acinetobacter towneri strain PT23-B2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2638644..2649279
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXS94_RS12690 (PT23B2_24520) | aroK | 2639574..2640116 (-) | 543 | WP_004974468.1 | shikimate kinase AroK | - |
| ABXS94_RS12695 (PT23B2_24530) | pilQ | 2640154..2642295 (-) | 2142 | WP_353675778.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ABXS94_RS12700 (PT23B2_24540) | pilP | 2642356..2642880 (-) | 525 | WP_104852650.1 | pilus assembly protein PilP | Machinery gene |
| ABXS94_RS12705 (PT23B2_24550) | comO | 2642877..2643647 (-) | 771 | WP_131260644.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABXS94_RS12710 (PT23B2_24560) | pilN | 2643644..2644279 (-) | 636 | WP_004974461.1 | PilN domain-containing protein | Machinery gene |
| ABXS94_RS12715 (PT23B2_24570) | pilM | 2644279..2645337 (-) | 1059 | WP_353675263.1 | pilus assembly protein PilM | Machinery gene |
| ABXS94_RS12720 (PT23B2_24580) | ponA | 2645507..2648059 (+) | 2553 | WP_353675264.1 | penicillin-binding protein PBP1a | - |
| ABXS94_RS12725 (PT23B2_24590) | - | 2648130..2648933 (-) | 804 | WP_353675265.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23682.07 Da Isoelectric Point: 6.4746
>NTDB_id=110016 ABXS94_RS12710 WP_004974461.1 2643644..2644279(-) (pilN) [Acinetobacter towneri strain PT23-B2]
MAKINLLPWRDELREKRKKEFIVFCIAAAAVGVLLVALAWFFYNAKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPIAVRLVDELVRVTPSNMYLTKVSRTGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
KEENKDKAPSSVVPRVEESYGTFVVTSDLEEIAIPVTPTESNSTSAAGAAQ
MAKINLLPWRDELREKRKKEFIVFCIAAAAVGVLLVALAWFFYNAKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPIAVRLVDELVRVTPSNMYLTKVSRTGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
KEENKDKAPSSVVPRVEESYGTFVVTSDLEEIAIPVTPTESNSTSAAGAAQ
Nucleotide
Download Length: 636 bp
>NTDB_id=110016 ABXS94_RS12710 WP_004974461.1 2643644..2644279(-) (pilN) [Acinetobacter towneri strain PT23-B2]
ATGGCAAAGATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAAAAACGTAAAAAAGAATTTATTGTATTTTGTATTGC
AGCGGCTGCTGTTGGGGTGTTATTGGTGGCTTTGGCGTGGTTCTTCTACAACGCGAAGTTACAAGATCAAGAACAAGCCA
ATCAATTGGTGATCAGTACCAACCAAAACCTAGATGTACAATTAAAATCTTTAGAAGGCTTGCAAGAACAGCGTAATGCT
ATTGTTGAGCGCATGAAGCTTATTCAGGGCTTACAAAGTCAGCGTCCAATTGCCGTGCGTTTGGTGGATGAATTGGTGCG
TGTGACACCAAGCAATATGTACTTAACCAAAGTGAGCCGTACAGGCAATAAATTCACTTTTGAAGGCAAGGCTGAAAGTC
CAAATACTGTGGCTGAATTCTTGCGTAATTTGGAAGCATCGCCGTGGTATCGCAATGCATTTATGAATTCATTCTTAGCC
AAAGAAGAAAATAAAGATAAAGCACCAAGCTCTGTGGTTCCTCGTGTAGAGGAAAGTTACGGTACTTTTGTAGTAACTTC
AGATTTAGAAGAAATTGCAATTCCAGTAACACCAACAGAATCTAATTCAACATCAGCAGCGGGGGCAGCACAATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAAAAACGTAAAAAAGAATTTATTGTATTTTGTATTGC
AGCGGCTGCTGTTGGGGTGTTATTGGTGGCTTTGGCGTGGTTCTTCTACAACGCGAAGTTACAAGATCAAGAACAAGCCA
ATCAATTGGTGATCAGTACCAACCAAAACCTAGATGTACAATTAAAATCTTTAGAAGGCTTGCAAGAACAGCGTAATGCT
ATTGTTGAGCGCATGAAGCTTATTCAGGGCTTACAAAGTCAGCGTCCAATTGCCGTGCGTTTGGTGGATGAATTGGTGCG
TGTGACACCAAGCAATATGTACTTAACCAAAGTGAGCCGTACAGGCAATAAATTCACTTTTGAAGGCAAGGCTGAAAGTC
CAAATACTGTGGCTGAATTCTTGCGTAATTTGGAAGCATCGCCGTGGTATCGCAATGCATTTATGAATTCATTCTTAGCC
AAAGAAGAAAATAAAGATAAAGCACCAAGCTCTGTGGTTCCTCGTGTAGAGGAAAGTTACGGTACTTTTGTAGTAACTTC
AGATTTAGAAGAAATTGCAATTCCAGTAACACCAACAGAATCTAATTCAACATCAGCAGCGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70.283 |
100 |
0.706 |
| comN | Acinetobacter baylyi ADP1 |
71.078 |
96.682 |
0.687 |