Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABXS94_RS07635 | Genome accession | NZ_AP031566 |
| Coordinates | 1606067..1606441 (-) | Length | 124 a.a. |
| NCBI ID | WP_353674954.1 | Uniprot ID | - |
| Organism | Acinetobacter towneri strain PT23-B2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1601067..1611441
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXS94_RS07605 (PT23B2_14750) | tadA | 1601241..1601768 (-) | 528 | WP_353674953.1 | tRNA adenosine(34) deaminase TadA | - |
| ABXS94_RS07610 (PT23B2_14760) | - | 1601796..1602917 (-) | 1122 | WP_004976784.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABXS94_RS07615 (PT23B2_14770) | ung | 1602914..1603627 (-) | 714 | WP_096901164.1 | uracil-DNA glycosylase | - |
| ABXS94_RS07620 (PT23B2_14780) | - | 1603665..1604261 (-) | 597 | WP_104851897.1 | 6-carboxytetrahydropterin synthase | - |
| ABXS94_RS07625 (PT23B2_14790) | gspK | 1604444..1605427 (-) | 984 | WP_180169114.1 | type II secretion system minor pseudopilin GspK | - |
| ABXS94_RS07630 (PT23B2_14800) | xcpW | 1605441..1606064 (-) | 624 | WP_225555734.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABXS94_RS07635 (PT23B2_14810) | xcpV | 1606067..1606441 (-) | 375 | WP_353674954.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABXS94_RS07640 (PT23B2_14820) | - | 1606431..1606982 (-) | 552 | WP_004976794.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ABXS94_RS07645 (PT23B2_14830) | - | 1606989..1607603 (-) | 615 | WP_004976797.1 | TetR/AcrR family transcriptional regulator | - |
| ABXS94_RS07650 (PT23B2_14840) | - | 1607697..1608470 (-) | 774 | WP_004976800.1 | TatD family hydrolase | - |
| ABXS94_RS07655 (PT23B2_14850) | - | 1608495..1608836 (-) | 342 | WP_026438361.1 | PilZ domain-containing protein | - |
| ABXS94_RS07660 (PT23B2_14860) | - | 1608847..1609836 (-) | 990 | WP_286417460.1 | DNA polymerase III subunit delta' C-terminal domain-containing protein | - |
| ABXS94_RS07665 (PT23B2_14870) | kdsB | 1609851..1610612 (-) | 762 | WP_353674955.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 124 a.a. Molecular weight: 13749.78 Da Isoelectric Point: 6.2920
>NTDB_id=110007 ABXS94_RS07635 WP_353674954.1 1606067..1606441(-) (xcpV) [Acinetobacter towneri strain PT23-B2]
MKAKGFTLLEVMVALAIFATAAMAMTKVAMQYTQSTANAILRTKAQFVALNEVALMEMNRQWLSGTESKQVTQQGETWQI
DKSTQPTISPNVQRVDLQISLYNQDTGQVEAGVTSLVFFNAREQ
MKAKGFTLLEVMVALAIFATAAMAMTKVAMQYTQSTANAILRTKAQFVALNEVALMEMNRQWLSGTESKQVTQQGETWQI
DKSTQPTISPNVQRVDLQISLYNQDTGQVEAGVTSLVFFNAREQ
Nucleotide
Download Length: 375 bp
>NTDB_id=110007 ABXS94_RS07635 WP_353674954.1 1606067..1606441(-) (xcpV) [Acinetobacter towneri strain PT23-B2]
ATGAAAGCTAAAGGATTTACACTACTTGAAGTTATGGTGGCTTTGGCAATTTTTGCAACAGCAGCTATGGCAATGACCAA
AGTGGCGATGCAATATACCCAATCCACCGCCAATGCAATTTTAAGAACCAAAGCACAATTTGTGGCTTTGAATGAAGTGG
CATTGATGGAAATGAATCGGCAATGGTTAAGTGGAACAGAGTCAAAGCAAGTGACACAACAGGGCGAAACATGGCAAATT
GACAAGTCCACACAGCCAACCATTAGTCCGAATGTGCAACGTGTCGATCTTCAAATCAGTTTATATAATCAAGACACGGG
GCAAGTTGAAGCAGGAGTGACTTCTTTGGTGTTTTTTAATGCCCGTGAGCAATAA
ATGAAAGCTAAAGGATTTACACTACTTGAAGTTATGGTGGCTTTGGCAATTTTTGCAACAGCAGCTATGGCAATGACCAA
AGTGGCGATGCAATATACCCAATCCACCGCCAATGCAATTTTAAGAACCAAAGCACAATTTGTGGCTTTGAATGAAGTGG
CATTGATGGAAATGAATCGGCAATGGTTAAGTGGAACAGAGTCAAAGCAAGTGACACAACAGGGCGAAACATGGCAAATT
GACAAGTCCACACAGCCAACCATTAGTCCGAATGTGCAACGTGTCGATCTTCAAATCAGTTTATATAATCAAGACACGGG
GCAAGTTGAAGCAGGAGTGACTTCTTTGGTGTTTTTTAATGCCCGTGAGCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
77.5 |
96.774 |
0.75 |